Massilia varians: MasN3_17560
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Entry
MasN3_17560 CDS
T08769
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
mvar
Massilia varians
Pathway
mvar00260
Glycine, serine and threonine metabolism
mvar00270
Cysteine and methionine metabolism
mvar00450
Selenocompound metabolism
mvar00670
One carbon pool by folate
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01230
Biosynthesis of amino acids
Module
mvar_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MasN3_17560
00270 Cysteine and methionine metabolism
MasN3_17560
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MasN3_17560
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MasN3_17560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvar04147
]
MasN3_17560
Enzymes [BR:
mvar01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
MasN3_17560
Exosome [BR:
mvar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
MasN3_17560
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BDT58262
LinkDB
All DBs
Position
complement(1949104..1950276)
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AA seq
390 aa
AA seq
DB search
MTDQKKHIATRVIHGGQAPEPATGAVMPPIFATSTFRQESPGVHKGLDYGRSHNPTRWAL
ERCVADIESGSAAFAFASGLAAIAAVLELLPANSHIVAGDDMYGGTFRLFERVRRKSAGH
SFAYADLTDPDALGKALTPETRLVWVETPTNPMLKLADLAAIAALCRARGIITVCDNTFA
SPIVQRPLELGFDIVVHSTTKYMNGHSDVIGGVAVVGREERHAALAEGLGFIQNAVGAIQ
GPFDSFLVLRGIKTLALRVERSSANALALAQWLEHEPKVRKVFYPGLESHPQHALARRQM
NGFGGIVSIDLATDLAGSRRFLEACEVFTLAESLGGVESLIEHPALMTHASIPAEQRAEL
GIGDGLIRLSVGIEHLEDQREDLRRALAAV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccagaaaaagcacattgccacccgcgtgatccacggcggccaggcgccggag
ccggctaccggcgccgtgatgccgccgatcttcgccacctcgaccttccgccaggagagc
ccgggcgtgcacaagggcctggactacggccgctcgcacaacccgacccgctgggccctg
gagcgctgcgtggccgacatcgaaagcggcagcgcggccttcgccttcgcctccggcctg
gccgcgatcgcggcggtgctggaactgctgccggcgaactcgcacatcgtggccggcgac
gacatgtacggcggcaccttccgcctgttcgagcgcgtgcgcaggaagagcgccggccac
agcttcgcctacgccgacctgaccgatccggacgcgctcggcaaggcgctcacgcctgaa
accaggctggtgtgggtggagacgccgaccaacccgatgctcaagctggccgacctggcg
gccatcgcggccctgtgccgcgcgcgcggcatcatcaccgtgtgcgacaacaccttcgcc
agcccgattgtccagcgtccgctggaactcggcttcgacatcgtggtgcactcgaccacc
aagtacatgaacggccactccgacgtgatcggcggcgtggcggtggtcggcagggaggag
cgccatgcggccctggccgaggggctcggcttcatccagaacgccgtgggcgccatccag
ggtccgttcgacagcttcctggtgctgcgcgggatcaagaccctggccctgcgggtggag
cgcagcagcgccaacgcgctggcgctggcccagtggctcgagcacgagccgaaggtacgc
aaggtgttctatccgggcctggaatcgcacccgcagcacgcgctggcgcggcgccagatg
aacggcttcgggggcatcgtgtcgatcgacctggccaccgacctggccggcagcaggcgc
ttcctggaagcctgcgaggtgttcaccctggccgagagcctgggcggcgtcgagagcctg
atcgagcaccctgcgctgatgacccacgccagcatcccggccgagcagcgcgccgagctg
ggcatcggcgacggcttgatccgcctgtcggtcgggatcgagcacctggaagaccaacgc
gaggatttgcgccgcgcgctggccgcggtctga
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