Massilia varians: MasN3_18610
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Entry
MasN3_18610 CDS
T08769
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mvar
Massilia varians
Pathway
mvar03030
DNA replication
mvar03430
Mismatch repair
mvar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MasN3_18610
03430 Mismatch repair
MasN3_18610
03440 Homologous recombination
MasN3_18610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvar03032
]
MasN3_18610
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_18610
Enzymes [BR:
mvar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MasN3_18610
DNA replication proteins [BR:
mvar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MasN3_18610
DNA repair and recombination proteins [BR:
mvar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MasN3_18610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
DNA_pol3_tau_5
AAA_14
AAA_18
AAA_2
Glyco_tranf_2_5
TsaE
nSTAND3
AAA_30
Mg_chelatase
AAA_28
AAA_assoc_2
Herpes_Helicase
Rad17
AAA_24
Herpes_V23
Motif
Other DBs
NCBI-ProteinID:
BDT58367
LinkDB
All DBs
Position
2070500..2072635
Genome browser
AA seq
711 aa
AA seq
DB search
MSYQVLARKYRPKNFETLVGQEHVVRALTHALRTGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCVGPDGQGGITPEPCGACEACRAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVGHLENILGQEGVTYEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGQVTLD
AVQGMLGALDQSYLVRLLDALLAQDGADLMAVADEMASRSLSYNGALQDLGTLLHRIALA
QSVPSAVPQDLPELNDILRLAQAFDAQEVQLYYQIAVHGRNEIGLAPDEYAGFTMTLLRM
LAFRPGQGGAELPASAPAASVATGQAPSARAAAVAAASHAAVAPARPAPSAPPAPSATSA
PAASGPAPAMSSARAAINAALEAARAASGRSGGAKPRPEAAPAPAAAPPASAPAPAAPPP
APGPSAAMGAGRPGLGSTPPWEQPQAAQPPQPPQAVQQMQPPQARMQAAPSDDEPPSWVT
EFSDDTAVAAEAPAAVTAPPPVRAQTAPPHAYVVTPVPAIGWDGNWPALAASLPLRGVAQ
QLALQTELIECVAHEQAATFRLRVPVDTLRASGNSEKLTAALQEHFPSVRVSLDTEIGPT
WYTAAAEAKAAREERQRQAEALVAADPFVQAMERTFGAFVVPGSVKPAAAT
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgcccgcaaataccgtcccaagaacttcgaaacgctggtcggc
caggagcacgtcgtccgtgccctgacccatgcgctcaggaccggccgcctgcaccacgcc
tacctgttcacgggaacgcgcggggtcggcaagacgacgctgtcgcgtatcctggccaag
tcgctcaactgcgtcgggcctgacggccagggcgggatcacgccggagccctgcggagcg
tgcgaagcctgccgcgccatcgatgccgggcgcttcgtcgactacatcgagatggatgcg
gcctccaaccgcggcgtggacgagatggcccagctgctggaacaggcggtgtacgcgccg
agcaatgcgcgcttcaaggtctacatgatcgacgaggtgcacatgctcaccaaccacgcg
ttcaacgcgatgctgaaaacgctcgaggaaccgccgccgcacgtcaaattcatcctggcg
accaccgacccgcagaagatcccggtgacggtgctgtcgcgctgcctgcagttcaacctc
aagcagatgccgcccggccatatcgtcggccacctggaaaacatcctcggccaggaaggc
gtcacctatgagcagccagccctgcgcctgctggcgcaaggcgcccacggttcgatgcgc
gacgcgctgtccctgaccgaccaggcgatcgcctatgccgccggccaggtcacgctcgat
gcggtgcagggcatgctgggtgcgctcgaccagtcctatctggtgcgcctgctggacgcg
ctgctggcgcaggacggcgccgacctgatggcggtggccgacgagatggccagccgcagc
ctgtcgtacaacggcgcgctgcaggacctcggcaccctgctgcaccggatcgcactggcg
cagtcggtgccttccgcggtgccgcaagacctgccggaactgaacgacatcttgcgcctg
gcccaggccttcgacgcgcaggaagtgcagctgtattaccagatcgccgtgcacggccgc
aacgagatcggcctggcgcccgacgagtatgctggcttcaccatgaccctgctgcgcatg
ctggccttccgcccggggcagggcggcgccgaactgccggccagcgcgccggccgccagc
gtggcgacgggccaggcgccgtccgcacgggccgccgcggtggccgccgccagccatgcg
gcggtggcgccggcgcgcccggcaccgtccgcgcccccggcgccgtccgcaacgtcggca
ccggccgcatccggcccggcgccggccatgagttccgcgcgcgccgcgatcaatgcggca
ctggaagctgcgcgcgccgcttccggccgcagcggcggcgccaagccgcgtcccgaagcc
gcaccggcgccggccgccgcgccgccggcgtcagcgcctgcgcccgccgcgcccccgccg
gcgcccggcccgtcggccgccatgggggcaggccgtccgggcttgggctcgacgccgccg
tgggagcagccgcaagctgcccagccgccgcagccgccgcaagccgtccagcagatgcag
ccgccgcaggcgcgcatgcaggcggcgccgagcgatgacgagccgccttcctgggtcacc
gaattttccgacgacacggcagttgccgccgaagcgccggccgccgtcacggcgccgccg
ccggtgcgcgcgcagaccgcgccgccgcatgcctacgtggtcacgccggtgccggccatc
ggctgggacggcaactggccggcgctggccgccagcctgccgctgcgcggcgtggcacag
cagctggccctgcagaccgaactgatcgaatgcgtggcgcacgaacaggccgcgaccttc
cgcctgcgggtgccggtcgacaccctgcgcgccagcggcaacagcgagaagctgacggcc
gcgctgcaggaacacttcccctcggtgcgcgtcagcctcgataccgagatcggcccgacc
tggtacaccgccgcggccgaggccaaggcggcgcgcgaggaacgccagcgccaggccgaa
gccctggtcgccgccgatcccttcgtgcaggcgatggagcggaccttcggcgccttcgtc
gtgcccggctcggtgaagccggccgcagccacctga
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