Massilia varians: MasN3_24140
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Entry
MasN3_24140 CDS
T08769
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
mvar
Massilia varians
Pathway
mvar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MasN3_24140 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mvar01007
]
MasN3_24140 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvar03016
]
MasN3_24140 (lysS)
Enzymes [BR:
mvar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MasN3_24140 (lysS)
Amino acid related enzymes [BR:
mvar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MasN3_24140 (lysS)
Transfer RNA biogenesis [BR:
mvar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MasN3_24140 (lysS)
Prokaryotic type
Other AARSs
MasN3_24140 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TUG-UBL1
Motif
Other DBs
NCBI-ProteinID:
BDT58920
LinkDB
All DBs
Position
complement(2707098..2708603)
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AA seq
501 aa
AA seq
DB search
MVALDENKIMAERRAKLAALRQQGNPFPNDFVPQDKAADLVETYNGKTREELEAEPVNVV
LAGRMMLRREAGKKAAFATLQDSSGPSASGRIQIYITVDSAGEEAMEALRSYDLGDILGV
EGTLFKTKVDELTIKVTKLRLISKALRPLPDKFHGLADQETKYRQRYVDLIMNEETRRTF
KARTAAMSSMRRFMEKHGFMEVETPMLHPIPGGAAAKPFITHHNALDMEMYLRIAPELYL
KRLVVGGFDRVFEINRNFRNEGVSVRHNPEFTMMEFYAAYTDYKWIMDFTEQVIRQAAID
SNGSAVLTYGGRELDLSKPFQRLTIVEAIDKYAPGYTPEQLGSMDFLKQELLKFGVKPFA
TSGLGALQLALFEETAEALLWEPTFIIDYPVEVSPLARASDSREGITERFELFMVGREIA
NGFSELNDPEDQAARFLSQVAAKDAGDDEAMFYDADYIRALEYGMPPAGGCGIGIDRLMM
LITDSPNIRDVLLFPHLRKED
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtggtggcgctcgatgaaaacaagatcatggccgagcgccgcgccaagctggccgcgctg
cgccagcagggcaatcccttccccaacgacttcgtcccgcaggacaaggccgccgacctg
gtcgagacctacaatggcaagacccgcgaagagctggaagccgaacccgtcaacgtggtg
ctggccggccgcatgatgctgcgccgcgaagccggcaagaaggccgccttcgcgaccctg
caggacagctcgggcccgtcggccagcggtcgcatccagatctacatcacggtcgattcc
gccggcgaggaagcgatggaagccctgcgcagctacgacctgggcgacatcctgggcgtg
gaaggcacgctgttcaagaccaaggtcgacgagctgaccatcaaggtgacgaagctgcgc
ctgatctccaaggccctgcgcccgctgccggacaagttccacggcctggccgaccaggag
accaagtaccgccagcgctacgtcgacctgatcatgaacgaagagacgcgccgcaccttc
aaggcccgcactgccgcgatgtcctcgatgcgccgcttcatggaaaagcacggcttcatg
gaagtcgagaccccgatgctgcacccgatcccgggcggcgccgcggccaagcctttcatc
acccaccataacgcgctcgacatggaaatgtacctgcgcatcgcgccggaactctacctg
aagcgcctggtggtgggcggcttcgaccgcgtgttcgagatcaaccgcaacttccgcaac
gaaggcgtgtcggtccgtcacaacccggaattcacgatgatggaattctacgcggcctat
accgactacaagtggatcatggacttcaccgaacaggtgatccgccaggcggcgatcgac
tccaacggcagcgcggtgctgacctatggcggccgtgagctggacctgtccaagcccttc
cagcgcctgaccatcgtggaagcgatcgacaagtacgcgcccggctacaccccggagcag
ctgggttcgatggacttcctgaagcaggaactgctcaagttcggcgtcaagcccttcgcc
acctcgggcctgggcgcgctgcagctggcgctgttcgaagaaaccgccgaagccctgctc
tgggaaccgaccttcatcatcgactatcctgtggaagtgtcgccgctggcgcgcgcctcg
gacagccgcgaaggcatcaccgagcgcttcgagctgttcatggtgggccgcgagatcgcc
aacggcttctcggagctgaacgatccggaagaccaggccgcgcgcttcctgtcgcaggtg
gccgccaaggatgcgggcgacgacgaggcgatgttctacgacgccgactacatccgcgcg
ctggaatacggcatgccgccggctggcggctgcggcatcggcatcgaccgcctgatgatg
ctgatcaccgactcgccgaacatccgcgacgtgctgctgttcccgcacctgcgcaaggaa
gactaa
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