Massilia varians: MasN3_29400
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Entry
MasN3_29400 CDS
T08769
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
mvar
Massilia varians
Pathway
mvar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MasN3_29400 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvar02000
]
MasN3_29400 (xylF)
Transporters [BR:
mvar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
MasN3_29400 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
ADH_zinc_N
Peripla_BP_3
BRCT
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
BDT59446
LinkDB
All DBs
Position
complement(3312691..3313701)
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AA seq
336 aa
AA seq
DB search
MKKMIKAVGLAFAILFSGGVGVAHADATNPKIGFSIDDLRLERWARDRDYFTAAAQKLGA
KVYVQSADASEQRQIAQIENLISRGVDVLVIVPYNATVLNNAIREAKKAKIKVVSYDRLI
LNADVDAYVSFDNKAVGELQAQSLVNLKPKGNYYLLGGAPTDNNAKILREGQMKVLQPLV
DKGDVKIVGKQWVKDWSASEAMAIVENALTASGNKIDAVVASNDGTAGGAIQALAAQKLA
GKVLVSGQDADLAAVRRVIAGTQTMTVYKPLRALASNAASVAVQLVRNQKPAYNAQMHNG
VKNVDSLLLKPVLLNKSNVDLLVKDGFYSQAQLAGK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatgatcaaggccgtcggcctggcattcgcaatcctgttcagcggcggcgtc
ggcgtggcccacgcggacgccaccaatcccaagatcggcttctcgatcgacgacctgcgc
ctggagcgctgggcgcgcgaccgcgattacttcacggcggccgcgcagaagctgggcgcc
aaggtgtacgtacagtcggccgacgccagcgagcagcgccagatcgcccagatcgaaaac
ctgatctcgcgcggcgtggacgtgctggtgatcgttccctacaacgccacggtgctcaac
aacgccatccgcgaagcgaagaaggccaagatcaaggtggtgtcgtacgaccgcctgatc
ctgaatgccgatgtcgatgcctacgtctcgttcgacaacaaggccgtcggcgagctgcag
gcgcagtcgctggtgaacctcaagccgaagggcaactactacctgctgggcggggccccg
accgacaacaacgccaagatcctgcgcgaaggtcagatgaaggtgctgcagccgctggtg
gacaagggcgacgtcaagatcgtcggcaagcagtgggtcaaggactggagcgcttccgag
gcgatggccatcgtcgagaacgcgctgaccgcaagcggcaacaagatcgacgccgtggtc
gcctccaacgacggtaccgcgggcggcgcgatccaggcgctggcggcccagaagctggcc
ggcaaggtgctggtgtcgggccaggacgccgacctggcggcggtgcgccgcgtgatcgcc
ggcacccagaccatgaccgtctacaagccgctgcgcgcgctggcctcgaacgcggccagc
gtcgcggtgcagctggtgcgcaaccagaagccggcctacaacgcccagatgcacaacggc
gtcaagaacgtcgacagcctgctgctcaagccggtcctgctgaacaagtcgaacgtcgac
ctgctggtcaaggacggcttctattcccaggcacagctggccgggaagtaa
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integrated database retrieval system
