Massilia varians: MasN3_29930
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Entry
MasN3_29930 CDS
T08769
Symbol
abnA
Name
(GenBank) extracellular endo-alpha-(1->5)-L-arabinanase 1
Organism
mvar
Massilia varians
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
CdiA_helical
LuxQ-periplasm
Motif
Other DBs
NCBI-ProteinID:
BDT59499
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Position
complement(3383101..3384024)
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AA seq
307 aa
AA seq
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MAKEGGQYYLFSTGPGITLYSSSDMKSWKPEGRIFAGQPTWAKTAAPTFNDHIWAPDIYH
NNGKYYLYYSVSGFGKNTSGIGVTVNTTLDPRSPNYKWEDQGMVLQSVPGRDLWNAIDSH
VIDDENGTPWMSFGSFWTGLKLVKLDASRTKLAEPQEWHTIARRERPAYVPDEEAGPAQI
EAPFIFRKNGWYYLFASWDLCCKGKDSTYKVVVGRAKAITGPYLDRQGVDMAKGGGTLVI
QGDRDWKGLGHNSAYTFDGKDVMVLHAYESADRYKQKLKVLEMKWDGDGWPLVDQSELNR
YQSVRLP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagggcggccagtactacctcttcagcaccggccccggcatcaccctctac
agttcaagcgacatgaagtcctggaagccggaaggccgcatcttcgccggccagcccacc
tgggccaagacggcggcgccgaccttcaacgaccacatctgggcgccggacatctaccac
aacaacggcaagtactacctgtactactcggtgtcgggcttcggcaagaacacctccggt
atcggcgtgacggtcaacaccacgctcgatccgcgctcgccgaactacaagtgggaagac
cagggcatggtgctgcagtcggtgcccgggcgcgacctgtggaacgccatcgactcgcat
gtaatcgacgatgagaacggcacgccctggatgtccttcggctccttctggacgggcctg
aagctcgtcaagctcgacgccagccgcacgaagctggccgaaccgcaggaatggcacacc
atcgcccgccgcgagcgtccggcctacgtgccggacgaggaagcaggtccggcccagatc
gaggcgccgttcatcttcaggaagaacggctggtactacctgttcgcttcctgggacctg
tgctgcaagggcaaggacagcacctacaaggtggtggtcggccgcgccaaagccatcacc
ggcccctacctcgaccgccagggcgtggacatggccaagggcggcggcaccctcgtcatc
cagggcgaccgcgactggaaggggttgggccacaacagcgcctataccttcgacggcaag
gatgtcatggtgttgcacgcctatgaaagcgccgatcgctacaagcaaaaactgaaggtg
ctggagatgaaatgggacggcgacggctggccgcttgtcgaccagtctgaactcaaccgt
taccagagcgtccgcctgccatga
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