Massilia varians: MasN3_31580
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Entry
MasN3_31580 CDS
T08769
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
mvar
Massilia varians
Pathway
mvar00260
Glycine, serine and threonine metabolism
mvar00630
Glyoxylate and dicarboxylate metabolism
mvar00670
One carbon pool by folate
mvar00785
Lipoic acid metabolism
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01200
Carbon metabolism
Module
mvar_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MasN3_31580 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MasN3_31580 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MasN3_31580 (gcvP)
00670 One carbon pool by folate
MasN3_31580 (gcvP)
Enzymes [BR:
mvar01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
MasN3_31580 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BDT59664
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Position
3566919..3569798
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AA seq
959 aa
AA seq
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MTRSSLTQLEARDSFIPRHIGPSESEQAAMLSTLGYASRAALIDAVVPANIRRQDTMDLG
QFVEPRSEEEALATLKALASKNKVMKSMIGQGYYGTHTPKVILRNIFENPAWYTAYTPYQ
PEISQGRLEAILNFQQMITDLTGMGIANSSMLDEGTAAAEAMTLLQRVGKSASRVFYVAD
DVLPQTLEVVRTRAEPIGVEVRVIAASEIETLNETCFGVLLQYPGVNGEVRDYRAAVEHL
HAAGAMVVVAADLLALTMLEAPGTWGADVVVGNSQRFGVPLGFGGPHAGYLATRDEYKRS
MAGRLVGVTVDAQGNQAYRLALQTREQHIRREKATSNICTAQVLLAVMAGMYAVYHGPQG
LKQIATRVHRQTAILAAGLKQLGAEVLNTTYFDTLTVKGDAQALHAAAEAAGINLRRIDD
GHVGISLDETTTRDDLAALFSIFGKDKSVDIDALDADVQDAFPAALARTTDYLTHPTFHR
YHAEHEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATSEMIPVTWPEFSNIHPFAPNDQ
TVGYREMIAQLEAMLCAATGYAAISLQPNAGSQGEYAGLLVIQKYHQSRGEGHRNICLIP
SSAHGTNPASASMVGMKVVVTACDENGNVDLADLKAKAEQYSRDLACVMVTYPSTHGVFE
EGIRELCEIVHQHGGQVYVDGANMNAMVGVAAPGAFGGDVSHLNLHKTFCIPHGGGGPGV
GPIGVGAHLAPFLPNQLSTGYVRNEAGIGAVSAAAYGSASILPISWMYIAMMGASGLTAA
TEVAILNANYIARRLAPHYPVLYTGHDGLVAHECIIDLRPLQDKTGISNEDVAKRLMDFG
FHAPTMSFPVPGTLMIEPTESESKAELDRFIEAMITIHAEIVKVERGEYDKMDNPLKGAP
HTAEVVTADEWAHTYSREVAAFPVASLRKKKYWPPVGRADNVYGDRNLFCGCAPISDYE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctccagcctcacccaactcgaagcgcgcgactccttcatcccgcgccatatc
ggcccgtccgaatccgaacaggcagccatgctgtcgaccctgggctacgcctcgcgcgcc
gccctgatcgacgctgtcgtgcccgcgaacatccgccgccaggacacgatggacctcggc
cagttcgtcgaaccgcgcagcgaggaagaagcgctggcgaccctgaaagcgctggcttcg
aagaacaaggtcatgaagtcgatgatcggccagggctactacggcacccataccccgaag
gtcatcctgcgcaacatcttcgagaacccggcctggtacaccgcctacaccccctaccag
ccggagatctcgcagggccgcctggaggcgatcctgaacttccagcagatgatcaccgac
ctcaccggcatgggcatcgccaactcgtcgatgctggacgaaggcaccgccgccgccgaa
gccatgaccctgctgcagcgcgtcggcaagtccgcttcccgcgtcttctacgtggccgac
gacgtgctgccgcagactctggaagtggtgcgcacccgcgccgagccgatcggcgtcgaa
gtgcgcgtgatcgccgcgagcgagatcgaaaccctgaacgagacctgcttcggcgtgctg
ctgcagtacccgggcgtgaacggcgaagtgcgcgactaccgcgccgcggtggagcacctg
cacgccgccggcgccatggtggtggtggccgccgacctgctggccctgaccatgctggaa
gcgccgggcacctggggcgccgacgtggtcgtcggcaacagccagcgcttcggcgtgccg
ctcggtttcggtggcccgcacgccggctacctggccacccgcgacgaatacaagcgctcc
atggccggccgcctggtcggcgtgacggtcgacgcccagggcaaccaggcctaccgcctg
gcgctgcagacccgcgagcagcacatccgccgcgaaaaggcgacctcgaacatctgcacc
gcccaggtactgctggccgtgatggccggcatgtacgcggtctaccacggcccgcagggc
ctgaagcaaatcgccacccgcgtgcaccgccaaaccgcgatcctggccgccggcctgaag
cagctcggcgccgaggtgctcaacacgacctatttcgacaccctgaccgtcaagggcgac
gcgcaagcactgcacgccgccgccgaagcggccggcatcaacctgcgccgcatcgacgac
ggccacgtcggcatctcgctggacgaaaccaccacccgcgacgacctcgccgccctgttc
tcgatcttcggcaaggacaagtcggtcgacatcgacgcgctggatgcggacgtccaggac
gccttcccggccgcactggcccggaccaccgactacctgacccacccgaccttccaccgc
taccacgccgagcacgagatgctgcgctacctgcgtagcctggcggacaaggacctggcg
ctggaccgcaccatgatcccgctcggttcctgcaccatgaagctgaacgcgacctcggag
atgatcccggtcacctggccggagttctcgaacatccacccgttcgcgcccaacgaccag
accgtcggctaccgcgagatgatcgcccagctggaagccatgctgtgcgccgccaccggc
tacgccgcgatctcgctgcagccgaacgctggctcccagggcgagtatgcgggcctcttg
gtgatccagaagtaccaccagtcgcgcggcgaaggccaccgcaacatctgcctgatcccg
tcctcggcgcacggcaccaacccggcatcggccagcatggtcggcatgaaggtggtggtc
accgcctgcgacgagaacggcaacgtggacctggccgacctgaaggccaaggccgagcag
tacagccgcgacctggcctgcgtcatggtcacctatccgtcgacccacggcgtgttcgaa
gagggtatccgcgaactgtgcgagatcgtgcaccagcacggcggccaggtctacgtggac
ggcgccaacatgaacgcgatggtcggcgtggccgcgccgggcgctttcggcggcgacgtc
agccacctgaacctgcacaagaccttctgcatcccgcacggcggcggcggccccggcgtc
ggcccgatcggcgtcggcgcccacctggcgccgttcctgccgaaccagctgtcgaccggc
tacgtccgcaacgaagcgggcatcggcgcggtgagcgcggccgcctacggctcggcctcg
atcctgccgatctcgtggatgtacatcgcgatgatgggcgcttcgggcctgaccgccgcg
accgaagtggcgatcctgaacgccaactacattgcgcgccgcctggccccgcactacccg
gtgctgtacaccggccacgacggcctggtcgcgcacgagtgcatcatcgacctgcgtccg
ctgcaggacaagaccggcatctcgaacgaggacgtggccaagcgcctgatggacttcggc
ttccacgccccgaccatgagcttcccggtgccgggcacgctcatgatcgagccgaccgag
tcggagtcgaaggccgagctggatcgcttcatcgaagcgatgatcaccatccacgccgag
atcgtgaaggtcgagcgcggcgagtacgacaaaatggacaacccgctcaagggcgccccg
cacaccgccgaggtggtgaccgccgacgagtgggcccacacctactcgcgcgaagtggcg
gccttcccggtcgcctcgctgcgcaagaagaagtactggccgccggtcggccgcgcggac
aacgtctacggcgaccgtaacctgttctgcggctgcgcgccgatcagcgattatgaataa
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