Massilia varians: MasN3_32490
Help
Entry
MasN3_32490 CDS
T08769
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mvar
Massilia varians
Pathway
mvar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MasN3_32490 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_32490 (recD)
Enzymes [BR:
mvar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MasN3_32490 (recD)
DNA repair and recombination proteins [BR:
mvar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MasN3_32490 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
SH3_13
Viral_helicase1
Helicase_RecD
AAA_22
PhoH
UvrD-helicase
DEAD
AAA_28
SLFN-g3_helicase
AAA_16
TraI_hel_assoc_N
AAA_24
ResIII
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BDT59755
LinkDB
All DBs
Position
complement(3653546..3655495)
Genome browser
AA seq
649 aa
AA seq
DB search
MLKHEADIALLWSELARLSETGELRRLSYAFARFVASLGAAPPALVLATSVLSELEGKGH
SCLQLADLAAGPAGLLGWEDEQWKLLARAAGPLPRNAQGWAQALSGCQQVWDVGAFDYDQ
PLVLDGDRLYLRRYWRDEMLVAQAVRERATRTRAVDEKAVRAWLDMLFASQGSREGPDWQ
KLACAIALRGSMAIITGGPGTGKTYTVARLLALLFATAPEAGSQRIALAAPTGKAAARLK
QSIDKALGELADKVGSTLPLRELTLRMGAARTLHSLLGARPDTRAFAHHRGNPLDVDVLI
VDEASMVHLEMMAALLDALPPGATLILLGDKDQLASVEAGAVLGDLCHNAGAGGYTDATC
DYVLAASGEELPGEFLGDAGALAQQTVMLRHSRRFGGPIGQLALAVNAGDAVRAESVLRA
AEPSVRWIENAQQQHLLQLAQSGYGSYLDVLNTGPRAGLNTNHEEWVRQVLQRFESFRIL
CAVRDGEWGVSGLNEAVARRLAQAGLLRPSGEWYVGRPVMVTRNDYGTGVYNGDIGLTLP
DPARPGALRVYFLEGDTVRSVLATRLRNVETAFAMTVHKSQGSEFRHTVLALPRERGAVL
TRELVYTGITRASEMFTLVTPPGAALHEAIAERTHRTSGLRGMIAPTSR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacatgaagccgacatcgcgctgctgtggagcgagctggcgcgcctgagcgaa
accggcgagctgcgccgcctgtcctacgccttcgcccgcttcgtggcctcgcttggggcg
gcgccgcctgcgctggtgctggccacgagcgtgctgtccgagctggaagggaagggccac
agctgcctgcagctggccgacctggccgcaggtcccgcagggctgctcggctgggaagac
gagcaatggaagctgcttgcgcgcgccgccggcccgctgcccaggaacgcacagggctgg
gcccaggcgctctccggctgccagcaggtctgggacgtcggcgccttcgactacgaccag
ccgctggtgctggacggcgaccgcctctacctgcgccgctactggcgcgacgagatgctg
gtggcccaggccgtgcgcgagcgcgcgacgcgcacccgcgcggtggacgagaaagcggtg
cgcgcctggctcgacatgctgttcgcctcgcaggggagcagggaggggccggactggcag
aagctggcctgcgcgatcgcgctgcgcggttcgatggccatcatcacgggcggccccggc
accggcaagacctataccgtggcgcgcctgctggcgctgctgttcgccaccgcacccgag
gcgggcagccagcgcatcgccctggccgcgccgaccggcaaggcggcggcgcgcctcaag
cagtcgatcgacaaggccctgggcgagctggccgacaaggtcggctcgaccctgccgctg
cgcgaactgacgctgcgcatgggcgccgcgcgcaccctgcacagcctgctgggcgcgcgt
cccgatacccgcgcctttgcccaccaccgcggcaatccgctcgacgtcgacgtcctgatc
gtcgacgaggcctcgatggtgcacctggagatgatggcggcgctgctcgatgcgctgccg
ccgggcgccaccctgatcctgctgggcgacaaggaccagttggcctcggtggaggcgggc
gccgtgctgggcgacctgtgccataacgccggcgccggcggctataccgatgccacctgc
gactacgtcctggccgccagcggcgaggaactaccgggcgaattcctgggcgacgccggc
gccctggcccagcagaccgtgatgctgcgccacagccgccgcttcggcgggccgatcggc
cagctggccctggccgtgaatgcgggcgacgcggtgcgcgccgaaagcgtgctgcgcgcc
gccgagccgagcgtgcgctggatcgaaaacgcccagcagcagcacctgctgcagctggcg
cagtccggctacggttcttacctggacgtgttgaataccggccccagggccggattgaac
acgaatcatgaagaatgggtgcgtcaggtcctgcagcgcttcgagtccttccgcatcctg
tgcgcggtgcgcgacggcgagtggggcgttagcggactgaacgaggcggtggcgcggcgc
ctggcccaggccggattgctgcgcccgagcggcgagtggtatgtcggccgcccggtgatg
gtgacccgcaacgactacgggaccggggtctacaacggcgacatcggcctcacgctgccc
gatccggcgcgcccgggcgccctgcgcgtgtacttcctcgaaggcgacacggtgcgcagc
gtgctcgcaacccgcctgcgcaacgtcgagacggccttcgcgatgacggtccacaagtcg
caaggctcggagttccgccataccgtgctggccctgccgcgcgaacgcggcgccgtcctc
acccgcgagctggtgtataccggcatcacccgcgccagcgagatgttcacgctagtgacg
cctcccggcgccgcgctgcacgaagccatcgccgagcgcacccaccgcaccagcggcctg
cgcggcatgatcgcgccgacctcacgctga
DBGET
integrated database retrieval system
