Massilia varians: MasN3_32630
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Entry
MasN3_32630 CDS
T08769
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvar
Massilia varians
Pathway
mvar03420
Nucleotide excision repair
mvar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MasN3_32630
03430 Mismatch repair
MasN3_32630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_32630
Enzymes [BR:
mvar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MasN3_32630
DNA repair and recombination proteins [BR:
mvar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MasN3_32630
MMR (mismatch excision repair)
Other MMR factors
MasN3_32630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH_5
AAA_12
HHH
AAA_11
ResIII
DUF7091
NACHT
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BDT59769
LinkDB
All DBs
Position
complement(3679130..3681220)
Genome browser
AA seq
696 aa
AA seq
DB search
MSAVLDQPASDDPFAGLNAEQRAAVEHDIGAAGARPLLVVAGAGSGKTNTLAHRVARLIQ
AGADPQRILLLSFSRRAAGELGQRAGGVLQRLLGKGGSANAAQLSLPWSGTFHAIGARLL
REYAGRIGLDESFTIHDRGDAEDLMGLVRHEIGLSTTEKRFPLKGTCLSIYSRVVNSREP
LEAVLQSTFPWCSEWEGQLKTLFGAYVDAKQEQNVLDYDDLLLFWSEMASDPELGLELGG
RFDHVLVDEYQDTNRLQGAIVTGMKPTGAGVMVVGDDAQSIYAFRGATVRNILDFPKQFT
QSAHVITLERNYRSTQPILDASNAVIAAARERHAKTLWTDKTSSLKPQLVLIPDEAEQAR
WVCRRILEQREAGIGLRSQAVLFRAASHSAALELELMRRNIPFVKFGGLKFLEAAHIKDV
LAVLRFAQNPSGRMAGFRVAQLIPGIGPATATRLLDAVGEAADPVAAVEGFAAPGKSRED
WAAFSALYRRLRTPGLRWPADIELVKQWYLPMLERRYDDAQVRAADVEQLAALAGGHATR
ESFLAEITLDPPEATSDRAGSPLLDEDYLILSTIHSAKGQEWTSVTVLNVVDGCIPSDMS
TGSIDDIEEERRLLYVAMTRAREHLHLVLPNRFFIKQQAQMGDRHVYAARTRFITPAMLK
HFEETTWLSAETQQLRKPVPESVRMLVRERARNVWK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtccttgaccagcccgcctccgacgatcccttcgccggcctgaatgccgaa
cagcgcgcggcggtcgagcacgacatcggcgccgccggcgcgcggccgctgctggtggtg
gccggggcgggctcgggcaagaccaatacgctggcgcaccgggtcgcacgcctgatccag
gctggcgccgatccccagcgcatcctgctgctgagcttctcgcggcgtgccgccggggag
ctggggcagcgcgccggcggcgtgctgcagcgcctgctcggcaagggcggcagcgccaac
gcggcccagctgagcttgccctggtccggcaccttccacgcgatcggcgcgcgcctgctg
cgcgagtatgccggccgcatcggcctggacgaatccttcaccatccacgaccgtggcgac
gccgaagacctgatgggactggtgcgccacgagatcggcctgtcaacgacggaaaagcgc
tttccgctgaagggcacctgcctgtcgatctattcgcgcgtggtcaacagccgcgagccc
ctggaggcggtgctgcaatccaccttcccctggtgcagcgagtgggaagggcaactgaag
accctgttcggcgcctacgtcgatgccaagcaggagcagaacgtgctcgattacgacgac
ctgctgctgttctggtcggagatggcgagcgacccggagctggggcttgaactgggcggg
cgcttcgaccacgtgctggtggacgaataccaggacaccaaccgcctgcagggggcaatc
gtcaccggcatgaagcccaccggcgcgggcgtgatggtggtcggtgacgatgcccagtcg
atctatgcctttcgcggcgccaccgtgcgcaacatcctcgacttcccgaagcagttcacg
cagagcgcccacgtcatcacgctggagcgcaactaccgctcgacccagcctatcctggac
gcttccaacgccgtcatcgcggccgcccgcgaacgccacgccaagacgctctggaccgac
aagacatccagcctcaagccgcaactggtcctgatcccggacgaagccgagcaggcgcgc
tgggtctgccgccgcatcctggagcagcgcgaggccggcatcggcttaaggtcgcaggcg
gtgctgttccgcgcggccagccacagcgccgcgctggagctggagctgatgcgccgcaac
atccccttcgtgaagttcggcggcctgaagttcctggaagcggcccacatcaaggacgtg
ctggcggtgctgcgcttcgcccagaaccccagcgggcgcatggcgggctttcgcgtcgcc
cagctgatcccggggatcggcccggcaacggccacccgcctgctggacgccgtaggcgag
gccgccgacccggtggcggcggtggagggcttcgccgcgccgggcaagagccgcgaggac
tgggccgccttcagcgcgctgtaccggcgcctgcgcacgcccggcctgcgctggccggcc
gacatcgagctggtcaagcaatggtacttgccgatgctcgaacgcaggtacgacgacgcc
caggtgcgcgccgccgacgtcgagcagctggccgccctggcgggcgggcacgcgacgcgc
gagagcttcctggccgagatcacgctggacccgcccgaagccaccagcgaccgcgccggc
agcccgctgctcgacgaagactacctgatcctatcgaccatccattccgccaagggacag
gagtggacatcggtgacggtgctgaacgtggtggacggctgcatcccgtccgacatgagc
accggcagcattgatgacatcgaagaagagcggcgcctgctctacgtggccatgacccgc
gcccgcgaacacctgcacctggtgctgccgaaccgtttcttcatcaagcagcaggcgcag
atgggcgaccgccacgtctatgccgcgcgcacgcgcttcatcaccccagccatgctcaag
catttcgaggaaaccacctggctgagcgcggagacgcagcagctgcgcaagccggtgccg
gagagcgtgcgcatgctggtgcgggagcgggccaggaacgtgtggaaataa
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