Massilia varians: MasN3_32850
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Entry
MasN3_32850 CDS
T08769
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mvar
Massilia varians
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvar03032
]
MasN3_32850
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_32850
Enzymes [BR:
mvar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MasN3_32850
DNA replication proteins [BR:
mvar03032
]
Prokaryotic type
DNA Topoisomerases
MasN3_32850
DNA repair and recombination proteins [BR:
mvar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MasN3_32850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
BDT59791
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Position
3703573..3704763
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AA seq
396 aa
AA seq
DB search
MHSEENGSADNPLSDPPAAAKAAGLRYVHDDRPGIRREQSGGGFRYLDAGGDPVADEASL
ARIKSLAIPPAWTEVWICPQANGHLQATGRDARGRKQYRYHPKWRAVRDEVKYERMLNFG
QALPAIRKEVDRALSLPGMPREKMLATIVYLLEATMMRVGNEEYARTNKSFGLTTLRNRH
VKVDGSDVEFRFRGKSGVYHKVQVHDRRVARIIRRSRDLPGQELFQYVDDEGETHSIDSS
DVNDYLRAITGEDYTAKDFRTWSGTVLAALALQEFEKFDSEAQAKKNIVRAIESVAEKLG
NTPSVCRKCYVHPVVLDAYLDGAVLESLRERTEQELTDDLHALQPEEAAVLALLQQRLRH
EQEQERQRARAAPAKSAKPGRAPRRRAAPQAMRGAA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgaagaaaacggcagcgccgacaacccgctcagcgatccacccgccgccgcc
aaggccgccgggctgcgctacgtccacgacgaccgccccggcatccggcgcgaacaatcc
ggcggcggatttcgctacctcgacgccggcggcgacccggtcgccgacgaggccagcctg
gcccgcatcaagtccctggcgatcccgccggcctggaccgaggtctggatctgcccgcag
gccaacggccacctgcaggccaccggccgcgacgcccgcggacgcaagcagtaccgctac
cacccgaaatggcgcgccgtgcgcgacgaggtgaagtacgagcgcatgctgaacttcggc
caggcgctgcccgccatccgcaaggaagtcgaccgcgccctgtcgctgcccggcatgccg
cgcgaaaaaatgctggccaccatcgtctatctgctcgaggcgaccatgatgcgcgtcggc
aatgaggaatatgcccgcaccaacaagtcgttcggcttgacgacattacgcaaccgccac
gtcaaggtggacggcagcgacgtcgagttccgcttccgcggcaagagcggggtgtatcac
aaggtgcaggtgcacgaccggcgcgtggcccgcatcatccggcgctcgcgcgacctgccg
ggccaggaactgttccagtacgtggacgacgagggcgaaacccacagcatcgattcgagc
gacgtcaacgactacctgcgcgcgatcaccggcgaggactacaccgccaaggattttcgc
acctggtcgggcaccgtgctggccgccctcgcactacaggagttcgagaagttcgactcc
gaggcccaggccaagaagaacatcgtgcgcgcgatcgagtcggtggccgagaagctcggc
aatacgccgtcggtctgccgcaagtgctacgtgcacccggtggtgctcgacgcctacctc
gacggggcggtgctggaatccctgcgcgagcgcaccgagcaggaattgacggacgacctg
cacgccctgcagccggaagaagccgcggtgctggcactgctgcagcagcgcctgcgccat
gaacaggaacaggagcggcagcgcgcccgggccgcccctgccaagtcagccaaacccggg
cgcgcgccgcgccgccgcgccgccccccaagccatgagaggagcagcatga
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