Massilia varians: MasN3_36410
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Entry
MasN3_36410 CDS
T08769
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mvar
Massilia varians
Pathway
mvar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MasN3_36410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_36410
Enzymes [BR:
mvar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MasN3_36410
DNA repair and recombination proteins [BR:
mvar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MasN3_36410
Prokaryotic type
MasN3_36410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDT60147
LinkDB
All DBs
Position
complement(4080682..4081452)
Genome browser
AA seq
256 aa
AA seq
DB search
MSTHPIPAPIIVALDRADASWRPVLEAGLQAVASADPGYLPALAVDDYLPLDGRIFAAFA
QPLEKVKYVLVGEGPYPRAESATGFCFMDGAVGALWSETGLSKPVNRATSLRNFMKMLLV
ANGQLDADATGGSAMVPVAQAARTDGSIQTLAQLQDNLLEHGFLLLNAALVFRKHVAPAI
DARAWQPFLQVVLAALASQPQPPTLVLWGKIAEQLKKLPEAARLPQIQAEHPYNLSFIQH
EGMQALFGPMELLRLR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccaccccattcccgccccgatcatcgtcgccctggaccgtgccgacgcctcc
tggcgcccggtcctcgaggccggcctgcaggccgtcgccagcgccgacccgggctacctg
ccggcgctggccgtcgatgactacctgccgctcgacggccgcatcttcgccgcctttgcc
cagccgctggagaaagtgaagtatgtgctggtgggggaggggccctacccgcgcgccgaa
agcgccacgggcttttgcttcatggacggcgccgtgggcgcgctgtggtcggagacgggg
ctgtcgaagccggtcaaccgcgccacctcgctgcgcaacttcatgaagatgctcctggtg
gcaaacgggcaactcgatgccgacgccaccggcggcagcgccatggtgccagtggcccag
gccgcccgcaccgacggctcgatccagaccctggcccagctgcaggacaatctgctcgag
cacggtttcctgctgctgaacgcggccctggtgtttcgcaagcacgtggcgccggccatc
gacgcacgcgcctggcaaccattcctgcaagtcgtgcttgccgccctggcaagccagcct
cagccgcccaccctggttctgtggggcaagatcgccgaacagctgaaaaagctgccggaa
gcggcgcgcctgccgcagatccaggccgagcacccgtacaacctgtccttcatccagcac
gaggggatgcaggcattgttcgggccgatggaattgctgcgtttgcgataa
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