Massilia varians: MasN3_37920
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Entry
MasN3_37920 CDS
T08769
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mvar
Massilia varians
Pathway
mvar00020
Citrate cycle (TCA cycle)
mvar00190
Oxidative phosphorylation
mvar00650
Butanoate metabolism
mvar00720
Other carbon fixation pathways
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01120
Microbial metabolism in diverse environments
mvar01200
Carbon metabolism
Module
mvar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mvar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mvar_M00149
Succinate dehydrogenase, prokaryotes
mvar_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MasN3_37920 (sdhA)
00650 Butanoate metabolism
MasN3_37920 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MasN3_37920 (sdhA)
00720 Other carbon fixation pathways
MasN3_37920 (sdhA)
Enzymes [BR:
mvar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MasN3_37920 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
FAD_binding_3
Pyr_redox_2
GIDA
Pyr_redox_3
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BDT60298
LinkDB
All DBs
Position
complement(4238357..4240135)
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AA seq
592 aa
AA seq
DB search
MAAIKTAIPTRRFDAVIVGAGGSGMRASLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDDWYWHMFDTVKGGDYLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANFGEKPVQRACAAADRTGHALLHTLYQRNVRARTHFFVEWMALDLIRDADG
DVLGVLALEMETGDVMILEAKTTIFATGGAGRIFAASTNAFINTGDGMGMAARAGLPLQD
MEFWQFHPTGVSGAGVLITEGVRGEGGILINSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDHVLLDLRHIGKDTIEKRLPSILEIGHKFANVDATKEPIPVVPTIHYQ
MGGIPTNIHGQVVAPDGTGGQKIVGGLYAIGECACVSVHGANRLGTNSLLDLVVFGRAAG
NHVVASNLKQKVNKPLPKDAADFGLDRLNRLETSTGGEKVQHVANDIRATMQKYCGVFRT
QELLDAGVKEIMKLDERRKHVSFKDKSKVFNTARQEALELDNLIETAKATIVSAAARPES
RGAHAHSDYPNRDDENWMKHTLWFSDNNRLEYKPVVQKPLTVDTFKPKARTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcaatcaaaactgcaatccctacccgccgctttgacgcggtcatcgttggcgcc
ggtggttccggcatgcgcgcatcgctgcaattggccgaagccggcctgaacgtcgcggtg
ctgtcgaaagtgttcccgacccgttcgcacaccgtggctgcccagggcggcatcggtgcc
tcgctgggcaacatgagcgaagacgactggtactggcacatgttcgacaccgtcaagggt
ggcgattacctgggcgaccaggatgcgatcgaattcatgtgccgcgaagccccgaaggtc
gtgtacgaactcgaacacttcggcatgcccttcgaccgcaacccggacggcaccatctac
cagcgtccgttcggcggccacaccgcgaacttcggcgaaaagccggtccagcgcgcctgc
gccgcggccgaccgtaccggccacgcgctgctgcacaccctgtaccagcgtaacgtccgt
gcccgcacccacttcttcgtcgagtggatggccctcgacctgatccgcgacgccgacggc
gacgtgctcggcgtgctggccctcgaaatggaaaccggcgacgtgatgatcctggaagcg
aagaccaccatcttcgccaccggcggcgcaggccgcatcttcgccgcgtcgaccaacgcc
ttcatcaacaccggcgacggcatgggcatggcggcgcgcgccggcctgccgctgcaggac
atggagttctggcagttccacccgaccggcgtgtccggcgcgggcgtcctcatcaccgag
ggcgtgcgcggcgagggcggcatcctgatcaactcgaacggcgaacgcttcatggagcgt
tacgcgccgaccctgaaggacctggcgccgcgcgacttcgtctcgcgttcgatggaccag
gaaatcaaggaaggccgcggctgcggtccgaacaaggaccacgtgctgctggacctgcgc
cacatcggcaaggacaccatcgagaagcgcctgccgtcgatcctggaaatcggccacaag
ttcgccaacgtcgacgccaccaaggaaccgattcccgtggtcccgaccatccactaccag
atgggcggcatcccgaccaacatccacggccaggtcgtcgcacctgacggcaccggcggc
cagaagatcgtgggcggcctgtacgcgatcggcgaatgcgcctgcgtctcggtccacggc
gccaaccgcctcggcaccaactcgctgctcgacctggtggtgttcggccgcgcggccggc
aaccacgtggtggcatcgaacctgaagcagaaggtcaacaagccgctgccgaaggacgcc
gccgacttcggcctggaccgcctgaaccgcctcgagacctcgaccggcggcgagaaggtc
cagcacgtcgccaacgacatccgcgccaccatgcagaagtactgcggcgtgttccgtacc
caggaactgctggacgccggcgtcaaggagatcatgaagctggacgagcgccgcaagcac
gtgtcgttcaaggacaagtcgaaggtgttcaacaccgcccgccaggaagcgctggaactc
gacaacctgatcgagaccgccaaggcgaccatcgtgtcggccgccgcgcgtccggaatcg
cgcggcgcccacgctcacagcgactacccgaaccgcgacgacgagaactggatgaagcac
accctgtggttctcggacaacaaccgtctcgagtacaagccggtcgtgcagaagccgctc
accgtcgacaccttcaagccgaaggcccgtactttctaa
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