Massilia varians: MasN3_38670
Help
Entry
MasN3_38670 CDS
T08769
Name
(GenBank) hypothetical protein
Organism
mvar
Massilia varians
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
LysM
TPR_10
TPR_6
TPR_19
Dynamitin
Trimer_CC
Motif
Other DBs
NCBI-ProteinID:
BDT60373
LinkDB
All DBs
Position
complement(4313598..4316675)
Genome browser
AA seq
1025 aa
AA seq
DB search
MAFALKSVTAAVASAVLLSSAASAAGLGKLTVLSALGQPLRAEIELTTTAGEDASSMAVK
LASPEAFRAANIEFNPALLALRFNVEQRAGRQFIRVSSTQPLNEPFVDMLIELSWNNGRL
VREYTFLLDPAELRNTQPAQAAAEARPAAPQPAAQPRAAAPQPAAPPSQAPQQAQPEPRR
EAPRAAAPAEAPASAAASRYRVRQGDTLGKIAAKLKPADISLDMMLVALYRANPDAFIGN
NMNRLKSGQILSVPDSGALRGSGEAEARGIVVAHAADFNAYRNKLAGQVANAAPQRTPQA
GQSAAGKITAKVEERPTAANESQDQLRLSKATQAAAGAQGAATASAEDSIARERELEQAQ
ARVKELEKNVNELEQLMTVKSRSGSEVQNAAAAGAVAGAATPAAPAAKPAAAAKPAKPAA
PAEPKPAEKGLADTLMDNINVVAGGAAILLLGALGISQRRRKKGDGAKGVVAEPSVLGVP
TQGAHSLYAEAGGQSVDTSNSVFNSSFAPSASQLDTNEVDPVAEADVYIAYGRDAQAEEI
LKEALRTHPERHAVRLKLLEIYAARKDLRAFETQASELYSLTRGTGDEWAQAAALGLGID
PSNPLYAAAAGAAPVAPAPSPQERDQQSLLSQQLEASFRGGAPVAALGAGAMAGAAYAAM
DHDQEQEATALPDFDATLPADASPVAEQRSDDNSLDFDLGGLSFEPIASTEPIAMAGPGR
DDALDDTAVPDLDFALDPLGDPVTSPPPDLAAAPAPASEEPFDLAFDMSFGEPEAAVQPE
TAHAPVAQHDMAGLAAEFELPPLPAVDEDAAPAPAAQSAHEDRLFDLYTMDFGLPPAAAA
PAAVAEATPFHEELPAVLGATAGASGTDDPLFDLDTMDFGSPAAPNAAPSLSQPALAPFE
FDAPPAAASPAADEDPFALDDVPAATPAAAASEPSFDLADIDLELPSFEQPAAFDADFLA
PSSEPALEPAALSPEHMEMETKLDLAIAYQEIGDKEGARELLDEVIKGGSSEQVSKASAM
RSLLA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgcgctgaaatcagtcaccgcggccgtggcaagtgccgtgctcctgtcgtcc
gccgcctcggccgcgggcctcgggaagctgacggtgctgtcggcactcggccagccgctg
cgtgccgaaatcgaactgacgacgaccgccggcgaggatgcctcgagcatggcagtgaaa
ctggcctcgccggaagccttccgcgcggccaatatcgaattcaacccggccctgctggcg
ctgcgcttcaacgtcgagcagcgcgccggccgccagttcatccgggtcagctcgacccag
ccgctgaacgagcccttcgtggacatgctgatcgagctgtcctggaacaacggccgcctg
gtgcgcgaatacaccttcctgctggacccggccgaactgcgcaacacccagccggcccag
gcggcggccgaggcccgtccggcagcgccgcagccggccgcccagccgcgcgcggcggcc
ccgcagccggccgcgccgccaagccaggcgccgcagcaggcgcagccggagccgcgccgc
gaggcgccgcgcgccgccgccccggccgaggctcccgccagcgcggccgcgtcgcgctac
cgcgtgcgccagggcgataccctgggcaagatcgccgccaagctcaagccggccgacatc
tcgctcgacatgatgctggtggcgctgtaccgcgccaatccggacgccttcatcggcaac
aacatgaaccgcctgaagtcgggccagatcctgtcggtgccggactccggcgcgctgcga
ggcagcggcgaagccgaggcacgcggcatcgtggtcgcgcacgcggccgacttcaatgcc
taccgcaacaagctggccgggcaggtggccaacgccgccccgcagcgtacgccgcaggca
ggccagagcgcggccggcaagatcaccgccaaggtcgaggaacgcccgaccgcggccaac
gaatcgcaggaccagttgcgcctgtcgaaagccacccaggccgccgccggcgcccaggga
gcggccaccgccagcgccgaagacagcatcgcgcgcgagcgcgaactggagcaggcccag
gcccgcgtcaaggaactcgagaagaacgtcaacgagctggaacagctgatgacggtcaag
agccgttccggcagcgaggtgcagaacgccgccgcggcgggcgccgtcgccggcgccgcg
acgccggccgcaccggcagccaagcccgcagcggcggccaagccggccaagccggccgcg
ccggccgaacccaagccggcggaaaagggacttgccgatacgctgatggacaacatcaat
gtcgtcgccggcggcgctgccatcctgctgctgggtgcgctcggcatctcgcagcgccgc
cgcaagaagggcgatggcgccaagggcgtcgttgccgaaccttcggtgctgggcgtgccg
acccagggagcgcactcgctgtacgcggaagcgggcggccagagcgtcgacaccagcaac
agcgtgttcaattccagcttcgcaccgtcggcctcgcagctcgacaccaacgaagtcgat
ccggtcgcggaagccgacgtctacatcgcctacggccgcgacgcccaggccgaggagatc
ctgaaggaggcgctgcgcacccatccggaacgccatgcggtgcgcctgaagctgctcgag
atctacgccgcccgcaaggacctgcgcgccttcgagacccaggccagcgagctgtacagc
ctgacgcgcggcaccggcgacgagtgggcccaggcggccgcgctcggcctgggcatcgac
ccgtccaatccgctgtatgccgctgccgccggcgccgcgccggtggcgccggcccccagc
ccgcaggagcgtgaccagcagtcgctgctgtcgcaacagctcgaagcctcgttccgcggc
ggtgccccggtcgccgccctcggcgccggcgccatggccggtgcggcctacgccgcgatg
gaccacgaccaggagcaggaggccaccgcactgccggacttcgatgccacgctgccggcc
gatgccagccccgtggccgagcagcgcagcgacgacaactcgctcgatttcgacctcggc
ggcctgagcttcgaaccgatcgccagcaccgagccgatcgccatggccggccccggccgc
gacgatgcgctggacgacaccgccgtgccggacctcgacttcgcgctcgatccgctcggt
gaccctgtcacctcgccgccgcccgacctcgccgccgcgcccgcgcccgctagcgaggag
cccttcgacctcgccttcgacatgagcttcggcgagccggaagccgcggtccagccggaa
accgcgcacgccccggtcgcgcagcacgacatggccggcctggccgccgaattcgagctg
ccgccgctgccggcggtcgacgaagacgcggcgccggcgcctgccgcgcaatccgcgcac
gaggatcggctgttcgacctctacaccatggacttcggcctgccgcccgctgcggcggcg
cccgccgccgtggccgaggcgaccccgttccacgaagagctgccggccgtcctcggcgca
acggctggcgcgagcggcacggacgatccgctgttcgacctcgacaccatggacttcggc
agcccggccgcaccaaacgccgcgccgagcctgtcccagccggcgctcgcgcctttcgag
ttcgacgcgccgccggcggcggccagcccggcagccgacgaagacccgttcgcactggac
gacgtgccggccgcaacgcctgccgccgcagcaagcgagccgagcttcgacctggccgac
atcgacctcgagctgccgtccttcgagcagcccgcagccttcgatgccgacttcctggcg
ccgtcgtccgagcctgccctggagccggccgcgctctcgccggaacacatggaaatggaa
accaagctcgacctcgcgatcgcctaccaggaaatcggcgacaaggaaggtgcgcgcgag
ctgctcgatgaagtcatcaagggtggcagcagcgaacaggtgagcaaggccagcgcgatg
cgctccctgctcgcgtga
DBGET
integrated database retrieval system
