KEGG   Massilia varians: MasN3_38800
Entry
MasN3_38800       CDS       T08769                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mvar  Massilia varians
Brite
KEGG Orthology (KO) [BR:mvar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvar03400]
    MasN3_38800
Enzymes [BR:mvar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MasN3_38800
    5.6.2.6  RNA 3'-5' helicase
     MasN3_38800
DNA repair and recombination proteins [BR:mvar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MasN3_38800
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII AAA_25
Other DBs
NCBI-ProteinID: BDT60386
UniProt: A0ABM8CAT8
LinkDB
Position
complement(4329234..4331696)
AA seq 820 aa
MSKNPVTERIDAWFAARGWTVFPFQRNVWKAALKGQSGLLHANTGAGKTFAVWFAALQRA
GLKTGRHTAGLRVLWITPMRALAADTMRALEATAAELMPEWQVGARTGDTGSAERARQAR
KMPAALVTTPESLSLMLSHAAAAEQFRHLDMIVIDEWHELMGSKRGVQVQLALARLRHWR
PELLIWGVSATMGNLDLARQVLLGGDEGVLVEGDLRKQIVVDCLIPENVARFPWGGHMGL
QMLGAVIREIEQHEATLVFTNTRAQSEIWYQNIIDERPDWAGLVALHHGSLDREVREWVE
MGLKKGELKAVICTASLDLGVDFLPVERVLQVGSAKGIARLLQRAGRSGHAPGRVSRVTL
VPTNSLELLEAAGAKKAVAARRIEGRYVPNKPFDVLVQHLVTVALGGGFTSSALYEEVRR
AWSYRNLDEEEWQWALDFVARGGQSLLAYPEYRRVLPDEEGVYRVPDTAIGRRHRMGIGT
IVSDSTISVKYMSGGRIGSVEESFISRMKPGDHFLFGGRILEFVRVHEMTAFVKRATSNR
GAIARWGGAKMPMSSELAHAALEELRLASAGVYDSPEMEAIRPLIEIQCRWSALPTNETL
VLESMKSREGWHLFVYPFAGRSVHMGLASLFAYRIGRVQPSTFSIAINDYGFELLTPEPV
DWTRIFAAETGIGVDLFTTDCLLEDVLGSLNATQLSQQRFREVARIAGLVFQGYPGQPKS
NRQLQASSSLFFEVFRKHDSGNLLLTQAQREVLEQELELTRLRETLVELHGRRVAYREVK
RATPFGFALMVERFREKVSTEKLSDRVARMVRELEKAAAA
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgagcaaaaaccccgtcaccgaacgcatcgacgcctggttcgccgcacgtggctggaca
gtgttcccgttccagcgcaatgtatggaaggcggcgctcaaagggcagtccggcctgctg
catgcgaacaccggcgccggcaagaccttcgcggtctggttcgccgccctgcagcgcgcc
ggcctcaagaccggccgccataccgccggcctgcgggtgttgtggatcaccccgatgcgc
gccctggccgccgacaccatgcgtgccctcgaagcgacggcggccgagctgatgcccgag
tggcaagtcggcgcccgcacaggcgacaccggctcggccgagcgggcgcgccaggcgcgc
aagatgccggcggcgctggtcaccacgcccgagagcctgtcgctgatgctcagccacgcc
gcggccgccgagcagttcaggcacctggacatgatcgtcatcgacgagtggcacgaactg
atgggcagcaagcgcggcgtgcaggtccagctggcgctggcgcggctgcgccactggcgc
ccggaactgctgatctggggcgtgtccgccaccatgggcaacctggacctggcgcgccag
gtgctgctcggcggcgacgagggcgtgctggtcgagggcgacctgcgcaagcagatcgtg
gtggactgcctgatccccgagaacgtggcgcgctttccctggggcggccacatgggcctg
cagatgctgggggccgtgatccgcgagatcgagcagcacgaggcgaccctggtgtttacc
aatacccgcgcccagtccgagatctggtaccagaacatcatcgacgagcgccccgactgg
gccggcctggtcgcgctgcaccacggttcgctcgaccgcgaagtgcgcgagtgggtcgag
atgggcttgaagaagggcgagctgaaggccgtgatctgcaccgccagcctggacctgggc
gtggacttcctgccggtcgagcgcgtgctgcaggtgggcagcgccaagggcatcgcgcgc
ctgctgcagcgcgccgggcgcagcggccacgcgccggggcgggtgtcgcgcgtgaccctg
gtgccgaccaacagcctggaactgctggaggcggccggcgccaagaaggcggtggcggcg
cgccgcatcgaagggcgctacgtgccgaataaacccttcgacgtgctggtgcagcacctg
gtgacggtggcgctgggcggcggtttcacctccagcgccttgtacgaggaggtcaggcgc
gcctggtcctaccgcaacctggacgaagaggaatggcagtgggcgctcgacttcgtcgcg
cgcggcggccagagcctgctcgcctatccggaataccggcgcgtgctgccggacgaggag
ggcgtgtaccgggtgccggatacggcgatcgggcggcgccaccgcatgggcatcggcacc
atcgtgtccgactcgaccatctcggtgaagtacatgagcgggggacgcatcggcagcgtc
gaggaatccttcatctcgcgcatgaagccgggcgaccacttcctgttcggcgggcgcatc
ctggaattcgtgcgggtccacgagatgacggccttcgtcaagcgcgccaccagcaaccgc
ggggcgatcgcgcgctggggcggagccaagatgccgatgtcctcggagctggcccatgcg
gcgctggaagagctgcgcctggcgtcggccggcgtctacgacagtccggagatggaggcg
atccggccgctcatcgagatccagtgccgctggtcggcgctcccgaccaatgagaccctg
gtcctggagagcatgaagagccgcgaaggctggcacctgttcgtctatcccttcgccggg
cgttcggtgcacatggggctggcctcgctgttcgcctaccggatcgggcgcgtgcagccc
tcgaccttctcgatcgcgatcaacgattacgggttcgaactgctcacgcccgagccggtg
gactggacccgcatcttcgccgccgagacgggcatcggtgtggacttgttcacgaccgac
tgcctgctggaagacgtgctgggcagcctgaacgcgacccagctgtcgcagcagcgcttc
cgcgaggtggcgcgcatcgccggcctggtgttccagggctatcccggccagccgaagtcg
aaccgccagctgcaggcctcgtcctcgctgttcttcgaagtcttccgcaagcacgactcc
ggcaacctgctgctcacccaggcccagcgcgaggtgctggagcaggagctggaactgacg
cgcctgcgcgagacgctggtcgagctgcacggacgccgcgtcgcctaccgcgaagtcaag
cgcgccacgcccttcggcttcgccctgatggtcgagcgcttccgcgaaaaggtcagcacc
gagaagctgtccgaccgggtggcgcgcatggtgcgcgagctggagaaggcggccgcggca
tga

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