Massilia varians: MasN3_40200
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Entry
MasN3_40200 CDS
T08769
Name
(GenBank) regulatory protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
mvar
Massilia varians
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvar03000
]
MasN3_40200
Transcription factors [BR:
mvar03000
]
Prokaryotic type
Helix-turn-helix
Other families
MasN3_40200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HHV6-IE
WHD_TBPIP
PilN
Motif
Other DBs
NCBI-ProteinID:
BDT60526
UniProt:
A0ABN6TFT5
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Position
4496152..4497006
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AA seq
284 aa
AA seq
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MLLDSIRTQLDSLSKSERKVALAVLAAPSNTVSQNITALAKSAQVSEPTVVRFCRTLGYD
GWHEFKLKLAQGLALALPGANEQPAPDDLAADLVNKICSRSINTLLDLRNNLKPELVQKA
LDILSRANKIEFYGQGSSGFVAADAQHKFFRSGVPTVAYTDPAIHSIAAALLREGDAVVA
ISQRGNNPALTRSAKLARRGGADVIVLAPSGTPLAEIATLFIPIDLVFAIDPYTPISARL
AYLVVIDVLAVGLALQRGPEFRKKMQNAQKALQEFDMQFDSFIG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgactccatccgcactcagctcgactcgctctcgaaatccgagcgcaaggtg
gcgctcgccgtgctcgcggcgccatccaacacggtgagccagaacatcacggcgctggcc
aagagcgcccaggtgtcggaaccgaccgtggtgcgcttctgccgcaccctcggctacgac
ggctggcacgagttcaagctcaagctggcgcaaggcctggcgctggcgctgccgggcgcg
aacgagcagccggcgccggacgacctggcggccgacctggtgaacaagatctgcagccgc
tcgatcaataccctgctcgacctgcgcaacaacctcaagccggaactggtccagaaggcg
ctcgacatcctgtcgcgcgccaacaagatcgagttctacggccagggctcgtcgggcttc
gtcgcggccgacgcccagcacaagttcttccgctcgggcgtgcccaccgtcgcgtatacc
gacccggcgatccactcgatcgcggcggccctgctgcgcgaaggcgacgcggtggtggcg
atttcgcagcgtggcaacaacccggccctgacccgctcggccaagctggcgcgccgcggc
ggcgccgacgtgatcgtgctggcgccctcgggcacgccgctggcggagatcgcgaccctg
ttcatcccgatcgacctggtgttcgcgatcgacccctatacgccgatctcggcgcgcctg
gcctacctggtcgtgatcgacgtgctggcggtggggctggcgctgcagcgcgggccggag
ttccgcaagaagatgcagaatgcgcagaaggccttgcaggagttcgacatgcagttcgac
tcctttatcggctga
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