Massilia varians: MasN3_41420
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Entry
MasN3_41420 CDS
T08769
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
mvar
Massilia varians
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvar03009
]
MasN3_41420
Enzymes [BR:
mvar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
MasN3_41420
Ribosome biogenesis [BR:
mvar03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MasN3_41420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BDT60648
UniProt:
A0ABN6TJ61
LinkDB
All DBs
Position
complement(4628581..4629294)
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AA seq
237 aa
AA seq
DB search
MSKLSLDRILQSQGFGTRKYCRALIEDGDVLVNGAVEDNYKATFDTADLVLTVFDEEWRY
REHLYIALYKPADYECSRKPSHHPGVLTLLPEQFGWREVQPVGRLDHDTTGLLLMSDDGP
FIHAQSSPKRHVPKVYQATTAEPVTDALVAQMLAGVQLHDEPAPLKAVSCVQRGEHLLEI
VLEQGKYHQVKRMLAAAGNHCSALHRSQIGGLTLESLGLKEGEWCYLEAEQLALLVP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactatccctggaccggatcctgcaatcgcagggattcggcacccgcaaatac
tgccgcgcgctgatcgaggacggcgacgtgctggtcaacggcgcggtcgaagacaattac
aaggccacgttcgacacggcggacctggtgctgacggtgttcgacgaggaatggcgctac
cgcgaacacctctatatcgcgctgtacaagccggccgattacgagtgctcgcgcaagccg
agccaccatcccggcgtattgaccttgctgcccgagcagttcgggtggcgcgaggtgcag
ccggtcggccgcctcgaccatgacaccaccgggctgctcctgatgtcggacgacggcccc
ttcatccacgcccagtcctcgcccaagcgccacgtgcccaaggtgtatcaggccaccacc
gccgagccggtcaccgatgccctggtcgcgcagatgctggccggcgtgcagctgcacgac
gagccggcgccgctcaaggcggtgtcctgcgtgcagcgcggcgagcacctgctcgagatc
gtgctggagcagggcaagtaccaccaggtcaagcgcatgctggcggccgccggcaaccat
tgcagcgcgctgcaccgctcgcagatcggcgggctgacgctggaatcgctcgggctgaag
gaaggggagtggtgctatctggaggcggagcagctggcactgttagtgccctag
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integrated database retrieval system
