Massilia varians: MasN3_43070
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Entry
MasN3_43070 CDS
T08769
Symbol
mdl
Name
(GenBank) multidrug ABC transporter permease/ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
mvar
Massilia varians
Pathway
mvar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MasN3_43070 (mdl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvar02000
]
MasN3_43070 (mdl)
Transporters [BR:
mvar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MasN3_43070 (mdl)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_16
AAA_29
SMC_N
AAA_22
RsgA_GTPase
DUF87
MMR_HSR1
AAA_21
AAA_30
cobW
NB-ARC
AAA_33
TsaE
Motif
Other DBs
NCBI-ProteinID:
BDT60813
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Position
4812574..4814325
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AA seq
583 aa
AA seq
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MSLARLIGGFVRRHWHAYVSSAFMLAGVAICTVLIPRKVGALVDGLAAQNLDQDALLLGL
AQLLGLGLAIYVLRVGWRIRLYSAAYNLGVELRTRLYARLAAQGPGFYQRQRTGDLMALA
TNDIDAIEMAAGEAMLAGFDGTLTLVMVLGIMTLGVDARLAGVALLPFPLMAFAFWRISR
QVHTAEADALKRFSALNDHVQESLSGVRTLRALGLEERSASQFSELAGKAADASLDAQRW
EAAYEPAVGLTLTAATGLTLGLGGYLVWNGQLTVGALTSFSMYLGQLIWPMFAAGWVLSL
IERGRAGLARLQPLLDAPLTVEDSGTFEQVGRGALVLDGVSFAYGEAGHPALDGVSVRVE
PGQTLGLVGPTGAGKSTLLRVLLRQATPQRGSVTWAGHPLESYRLDALRAAMSWVPQESF
LFSATIAENIALARPGASRAEIEDAARMASIHDDILRFPYGYDTPVGEKGITLSGGQRQR
VAIARALLADSALLLLDDALSAVDTGTETRILEHLDELRAARPERAAIIASHRLSAVAGA
DHIVVLREGRVVESGTHDELLLLDGWYASQWRYQQLEASIDAE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgcaaggctgatcggcggcttcgtccgccggcattggcatgcctatgtgtcg
tcggccttcatgctggccggcgtcgccatctgcacggtcttgattccgcgcaaggtcggc
gccctggtcgacggactggccgcccagaacctcgaccaggacgcgctgctgctcgggctg
gcccagctgctcggcctgggcctggccatctatgtgctgcgggtcggctggcgcatccgc
ctgtattcggccgcctacaacctgggcgtcgagctgcgcacgcgcctgtacgcgcgcctg
gccgcgcaagggccgggcttctaccagcgccagcgcaccggcgacctgatggcgctcgcc
accaacgacatcgacgccatcgagatggcggccggcgaagcgatgctggccggcttcgac
ggcaccctgaccctggtcatggtgctgggcatcatgaccctcggggtcgatgcgcgcctg
gccggcgtcgccctgctgcccttcccgctgatggccttcgcgttctggcgcatctcgcgc
caggtgcacacggcggaagccgatgcgctcaagcgcttctcggcgctcaacgaccacgtg
caggaatcgctgtcgggcgtgcgcaccctgcgcgccctcggcctggaggagcgcagcgct
tcccagttcagcgaactggccggcaaggcggccgacgccagcctcgatgcccagcgctgg
gaagcggcctacgaaccggcggtcggcctgaccctgacggcggccaccggcctgaccctg
ggcctgggcggctacctggtctggaacggccagctgacggtgggcgcgctcaccagcttc
tcgatgtacctgggccagctgatctggccgatgttcgcggccggctgggtgctgtcgctg
atcgagcgcggacgcgccggcctggcgcgcctgcagccgctgctcgacgcgccgctcacg
gtggaagacagcggcacgttcgagcaggtgggccgcggcgcgctggtgctcgatggcgtc
agcttcgcctacggcgaggccgggcaccctgccctcgacggcgtgtcggtgcgggtggag
ccgggccagaccctgggcctggtcggcccgaccggcgccggcaagtcgaccctgctgcgg
gtgctgctgcgccaggccacgccgcagcgcggcagcgtcacctgggccggccatccgttg
gaaagctaccggctggacgccctgcgcgcggcgatgagctgggtgccccaggaatccttc
ctgttctcggcgacgatcgccgagaacatcgccctggcccgcccgggcgcctcgcgcgcc
gagatcgaggacgcggccaggatggcctcgatccacgacgacatcctgcgcttcccctac
ggctacgacacgccggtgggcgaaaaaggcatcaccctgtcgggcggccagcgccagcgc
gtggcgatcgcgcgcgccctgctggccgacagcgcgctgctgctgctcgacgatgccctg
tcggcggtggacaccggcaccgaaacccggatcctggaacacctggacgagctgcgcgcg
gccaggcccgaacgcgccgccatcatcgccagccaccggctgtcggcggtggccggggcc
gaccacatcgtggtgctgcgcgaaggccgggtcgtcgaatccggcacccacgacgaactg
ctgctgctcgacggctggtatgccagccagtggcgctatcaacaactggaggccagcatc
gatgcagagtga
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