KEGG   Massilia varians: MasN3_43520
Entry
MasN3_43520       CDS       T08769                                 
Symbol
cafA
Name
(GenBank) ribonuclease G
  KO
K08301  ribonuclease G [EC:3.1.26.-]
Organism
mvar  Massilia varians
Brite
KEGG Orthology (KO) [BR:mvar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mvar03019]
    MasN3_43520 (cafA)
   03009 Ribosome biogenesis [BR:mvar03009]
    MasN3_43520 (cafA)
Messenger RNA biogenesis [BR:mvar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MasN3_43520 (cafA)
Ribosome biogenesis [BR:mvar03009]
 Prokaryotic type
  rRNA processing factors
   MasN3_43520 (cafA)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio
Other DBs
NCBI-ProteinID: BDT60858
UniProt: A0ABM8CC19
LinkDB
Position
4867602..4869113
AA seq 503 aa
MYDVALNNTARPAMNEDILINITPQETRVALILQGAVQELHIERTLTRGLAGNVYLGKVV
RVLPGMQSAFIDIGLERAAFLHVADIWEARNHEGPNGALAAPTPIEKLLFDGQVLTVQVI
KDPIGTKGARLSTQISIAGRMLVYLPQDHHIGISQKIEKEADREHLRTRLTSLLPKEEKG
GYIVRTQAEEASDADLAADVDYLRKTWAAIVQGARTRPPTSLLYQDLNLAQRVLRDFVHD
ETATIQVDSRENHAMLVEFAQVYTPSVLSRLTHYTGERPLFDLYGVEEEILRALGRRVDL
KSGGYLIVDQTEAMTTIDVNTGGYVGGRNFADTIFKTNLEAAHAIARQLRLRNLGGIIIL
DFIDMENNEHRNAVLAELKKTLARDRTKVSVSGFSALGLVEMTRKRTRESLAHILCEPCP
ACAGKGQVKTSRTICYEILRELLREAKQFNPREFRIVASQEVIDLFLEEESQHLAMLGDF
IGKRISLQVEKGYHQEQYDVILM
NT seq 1512 nt   +upstreamnt  +downstreamnt
gtgtatgatgtcgctctgaacaatactgcacggccggccatgaacgaagacatcctcatc
aacatcaccccgcaggaaacgcgcgtggcgctgatcctgcagggcgctgtgcaggaactg
cacatcgagcgcaccctcacgcgcgggttggcggggaacgtctatctcggcaaggtcgtg
cgcgtgctgccgggcatgcagtcggccttcatcgacatcggcctggagcgcgccgctttt
ctccacgtcgccgatatctgggaagcgcgtaatcacgaaggccccaacggcgccctggcc
gcgcccacccctatcgaaaagctgctgttcgacggccaggtgctgaccgtgcaggtcatc
aaggacccgatcggcaccaagggcgcgcgcctgtcgacccagatttcgatcgccggccgc
atgctggtctacctgccgcaagaccaccacatcggcatctcgcaaaagatcgagaaggaa
gccgaccgcgaacacctgcgcacccgtctgacgagcctgctgccgaaggaagaaaagggc
ggctacatcgtgcgcacccaggccgaggaagcctcggatgccgacctggcggccgacgtc
gactacctgcgcaagacctgggccgccatcgtacagggtgcgcgcacccggccgccgact
tccctgctctaccaggacctgaacctggcccagcgcgtgctgcgcgacttcgtgcacgac
gagaccgcgaccatccaggtggactcgcgcgagaaccacgccatgctggtcgagttcgcg
caggtctacaccccgagcgtgctgtcgcgcctgacccactacaccggcgagcgcccgctg
ttcgacctgtatggcgtcgaggaggaaatcctgcgtgcgctgggccgccgcgtcgacctc
aagagcggcggctacctgatcgtcgaccagaccgaggcgatgaccaccatcgacgtcaac
accggcggctacgtcggcgggcgcaactttgccgacaccatcttcaagaccaacctggaa
gcggcgcacgccatcgcgcgccagctgcgcctgcgcaacctgggcggcatcatcatcctc
gacttcatcgacatggagaacaacgagcaccgcaacgccgtgctcgcggaactcaagaag
accctggcgcgcgaccgcaccaaggtctcggtgagcggcttctccgcactcggcctggtc
gagatgacgaggaagcgcacgcgcgagtcgctggcccacatcctgtgcgaaccctgcccg
gcctgcgccggcaagggacaggtgaaaacctcgcgcaccatctgctacgagatcctgcgc
gaactgctgcgcgaagccaagcagttcaacccgcgcgagttccgcatcgtcgcctcgcag
gaagtcatcgacctgttcctggaagaggaatcgcagcacctggccatgctgggagacttc
atcggcaaacgtatttccttgcaggtggagaagggttaccaccaggaacagtacgacgtg
atcctgatgtag

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