Massilia varians: MasN3_44060
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Entry
MasN3_44060 CDS
T08769
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mvar
Massilia varians
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvar03016
]
MasN3_44060 (rnz)
Enzymes [BR:
mvar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MasN3_44060 (rnz)
Transfer RNA biogenesis [BR:
mvar03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MasN3_44060 (rnz)
Prokaryotic type
MasN3_44060 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BDT60912
LinkDB
All DBs
Position
4943730..4944704
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AA seq
324 aa
AA seq
DB search
MEIQFLGTSSGVPTRSRNMTAIAIRTRGARHWSLVDCAEGTQHRLLRSNLSPMSLRAIFI
THLHGDHCYGLPGLLASAGMLGRTEALSIVGPPALRGMIECVMEATQLTLPYPIDWVAVD
ALAHSDILPDLRAHATKLSHRIDSWAYSFTEAAVERKLDIGKLKAGGVPAGPAWGEIQQG
RNLVLPDGRTVVAEQFLLPPRRSRKAIIAGDNDTPELLALEAAGADVLVHEATYTEAILH
KVGPEPQHSSAAMVARVAEQAGVPNLILTHFSPRYLDPKQGKANVLTLDDIEREAREHYT
GTLALARDFARYELGKDGSLHPLP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccagttcctcggcacctcctccggcgtaccgacccggtcgcgcaacatgacg
gcgatcgcaatccgcacgcgcggcgcccggcactggtcgctggtcgactgcgcggaaggc
acgcagcaccggctgctgcgctcgaatttgtcgccgatgagcctgcgcgcgatcttcatc
acccacctgcacggcgaccactgctacggcctgcccggcctgctggccagcgccggcatg
ctgggccgcacggaagcactgagcatcgtcggcccgccggccctgcgcgggatgatcgaa
tgcgtcatggaagcgacgcagctgaccctgccctaccccatcgactgggtggcggtcgac
gcgctggcgcacagcgacatcctgcccgacctgcgggcgcacgccaccaaactgtcgcac
cggatcgattcctgggcctacagcttcaccgaggcggcggtggaacgcaaactcgacatc
ggcaagctgaaagcgggcggcgtccccgccgggccggcctggggcgagatccagcagggg
cgcaacctggtcctgccggatggccgcaccgtggtggccgagcaatttttgctgccgccg
cgcaggtcgcgcaaggcgatcattgcgggcgacaacgatacaccggagctgctggcgctc
gaagcggccggcgcggacgtgctggtgcacgaggcgacctatacggaagcgatcctgcac
aaggtggggccggagccgcagcacagctcggccgcgatggtggcccgggtggccgagcag
gccggggtgccgaacctgatcctgacccacttcagcccgcgctacctggaccccaagcag
ggcaaggcgaatgtcctgacgctggacgacatcgaacgcgaggcgcgcgagcattacacg
ggcacgctggcgctggcgcgcgacttcgcgcgttacgagctcgggaaggatggcagcctg
catccgctgccctga
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