Massilia varians: MasN3_45360
Help
Entry
MasN3_45360 CDS
T08769
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mvar
Massilia varians
Pathway
mvar02024
Quorum sensing
mvar03060
Protein export
mvar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MasN3_45360 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MasN3_45360 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MasN3_45360 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mvar02044
]
MasN3_45360 (ffh)
Enzymes [BR:
mvar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MasN3_45360 (ffh)
Secretion system [BR:
mvar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MasN3_45360 (ffh)
Eukaryotic Sec-SRP protein
MasN3_45360 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_31
AAA_22
AAA_16
ParA
AAA_30
nSTAND3
YqeC
T2SSE
ArsA_ATPase
AAA_14
GTP_EFTU
KTI12
AAA_33
6PF2K
AAA
APS_kinase
ATP_bind_1
Thymidylate_kin
AAA_19
Helicase_RecD
AAA_18
cobW
AAA_24
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDT61042
LinkDB
All DBs
Position
5086158..5087525
Genome browser
AA seq
455 aa
AA seq
DB search
MLDNLTQRLAKVVKTMRGEARLTEANTAEMLREVRMALLEADVALPAVREFIAKVKEKAL
GEEVIGSLSPGQALVGVVQRELAALMGADLGPDATQLSFAQQPPAIILMAGLQGVGKTTT
TGKLAKYLKEQKKKKVLTVSADVYRPAAIAQLESVTKQVGADFFPSTANDKPVDIARNAL
DWAKKHYHDVLIIDTAGRLGIDEAMMQEIAAVHAAVNPVETLFVVDAMLGQDAINTAKAF
NDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFAGVSEKLDGLEAFDPTRMANRVLG
MGDILALVEEARKGVDAEAATELANKIKGGGKFDMNDFKAQLTQMKKMGGMSGLLDKLPA
QFQQAASGANMDQAEKQVRRMVGIIDSMTPQERAKPDLIKANRKRRIAAGAGVQVQEVNR
MLNQYDQMQTMMKKLKGGGLMKMMRGMKGMMPGLR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctagataaccttacccaacgcctagccaaggtcgtcaagacgatgcgcggcgaagcg
cgcctcaccgaggcgaacaccgccgagatgctgcgcgaagtgcgcatggccctgctcgag
gccgacgtggcgctgccggcggtgcgcgaattcatcgccaaagtcaaagagaaagcgctg
ggcgaagaagtcatcggctcgctcagcccgggccaggccctggtcggcgtggtgcagcgc
gagctggccgccctgatgggcgccgacctcggccccgacgccacccagctgtccttcgcc
cagcagccgccggcgatcatcctgatggccggcctgcagggtgtgggtaaaaccaccacc
accggcaagctcgccaagtacctcaaggaacagaagaaaaagaaggtcctgacggtgtcg
gccgacgtctaccgtccggccgcgatcgcgcagctggagtccgtcaccaagcaggtcggc
gccgacttcttcccgtccaccgccaacgacaagccggtcgacatcgcgcgtaacgcgctg
gactgggccaagaagcactaccacgacgtcctgatcatcgacaccgctggccgcctcggc
atcgacgaagcgatgatgcaggagatcgccgcggtgcacgcggccgtcaatccggtcgag
accctgttcgtggtcgacgccatgctgggccaggacgcgatcaacaccgccaaggccttc
aacgacgcgctgccgcttaccggcgtggtgctgaccaagctcgatggcgattcgcgcggc
ggcgccgccctgtcggtgcgccacgtgaccggcaagccgatcaagttcgccggcgtgtcg
gaaaagctggacggcctggaagccttcgatccgacgcgcatggccaaccgcgtgctgggc
atgggcgacatcctggcgctggtcgaagaagcgcgcaagggcgtcgatgccgaggccgcg
accgagctggccaacaagatcaagggcggcggcaagttcgacatgaacgacttcaaggcc
cagctgacccagatgaagaagatgggcggcatgtccggcctgctcgataaactgccggcc
cagttccagcaggcagcaagcggcgccaacatggaccaggccgaaaagcaggtgcgccgc
atggtcggcatcatcgattcgatgacgccgcaggagcgcgccaagccggacctgatcaag
gccaaccgcaagcgccgcatcgcggccggcgccggcgtgcaggtgcaggaagtgaaccgc
atgctgaaccagtacgaccagatgcagaccatgatgaagaagctcaaaggcggcggcttg
atgaagatgatgcgcgggatgaagggcatgatgcccggcctgcgctga
DBGET
integrated database retrieval system
