Massilia varians: MasN3_49190
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Entry
MasN3_49190 CDS
T08769
Symbol
fadD_1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mvar
Massilia varians
Pathway
mvar00061
Fatty acid biosynthesis
mvar00071
Fatty acid degradation
mvar01100
Metabolic pathways
mvar01212
Fatty acid metabolism
mvar02024
Quorum sensing
mvar04146
Peroxisome
Module
mvar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MasN3_49190 (fadD_1)
00071 Fatty acid degradation
MasN3_49190 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MasN3_49190 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MasN3_49190 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mvar01004
]
MasN3_49190 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvar04147
]
MasN3_49190 (fadD_1)
Enzymes [BR:
mvar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MasN3_49190 (fadD_1)
Lipid biosynthesis proteins [BR:
mvar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MasN3_49190 (fadD_1)
Exosome [BR:
mvar04147
]
Exosomal proteins
Exosomal proteins of breast milk
MasN3_49190 (fadD_1)
Exosomal proteins of breast cancer cells
MasN3_49190 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BDT61425
LinkDB
All DBs
Position
complement(5507207..5508889)
Genome browser
AA seq
560 aa
AA seq
DB search
MDKFWLKSYEGGVPAEIDPTQYRSLTHLLEEAFRKYADRKAYACMGKTLSFAELDRLSGR
MAAWLQGRGLKPGARVAIMLPNVLQYPVAMAAVLRAGYVIVNVNPLYTPRELQHQLTDSG
AEAIVVLENFAHTLEQVVQHTQVKHIVVASMGDLLGGLKGTLVNLVVRKVKKMVPAWSLP
GSIGFKRMLAQAQGATLRPVSIGHDDIAFLQYTGGTTGVSKGAVLLHKHVIANVLQNEAW
FAPTLGKMKAGEQPQFVCALPLYHIYALTVCALLGLRVGGMNLLIPNPRDIPGFIKELGG
YRINIFPAVNTLYNGLVNNPEFAKLDFSGLLVCPGGGMAVQKAVADKWLSITGIPIVEGY
GLSETSPVVTANRCDITDFTGTIGLPLPSTEIRILDEAGNEVPFGTAGEIAVRGPQVMAG
YWQRDDETAKVMTPDGFFKTGDIGIMDEKGYTRIVDRKKDMILVSGFNVYPNEIEGVVAA
MPGVLEVACVGVPDKNSGEAVKLYIVKKDAALTSEQVMAFCKEQFTGYKRPKYVEFRETL
PKTNVGKILRRELRDEKTSA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttttggctcaagtcgtacgagggcggcgtacctgcggagatcgaccccacg
cagtaccgctccctgacgcatctgctggaggaggcgttccgcaagtacgccgaccgcaag
gcctatgcgtgcatgggcaagaccctgagcttcgcagaactggaccgcctgtccggccgc
atggcggcctggctgcagggccgcggcctgaagccgggcgcgcgcgtggccatcatgctg
ccgaacgtgctgcagtacccggtcgcgatggccgccgtgctgcgcgccggctacgtgatc
gtcaacgtcaatccgctctacaccccgcgcgagctgcagcaccagctgaccgactcgggc
gccgaggccatcgtggtgctggagaacttcgcgcacacgctggaacaggtggtccagcac
acccaggtcaagcacatcgtcgtggccagcatgggcgacctgctgggcggcctgaagggc
acgctggtcaacctggtggtccgcaaggtcaagaagatggtgccggcctggtcgctgccg
ggctcgatcggcttcaagcgcatgctggcgcaggcccagggcgcgaccctgcgtccggtc
agcatcggccatgacgacatcgccttcctgcagtacaccggcggcaccaccggcgtctcg
aaaggcgcggtgctgctgcacaagcacgtgatcgccaacgtgctgcagaacgaagcctgg
ttcgccccgaccctgggcaagatgaaggccggcgagcaaccgcagttcgtgtgcgcgctg
ccgctgtaccacatctatgcgctgaccgtgtgcgcgctgctgggcctgcgcgtgggcggc
atgaacctcctcattccgaatccgcgcgatatcccgggcttcatcaaggagctgggcggc
taccgcatcaatatcttcccggccgtgaacacgctctacaacggcctggtgaacaacccg
gaattcgccaagctcgacttctcgggcctcctggtgtgcccgggcggcggcatggcggtg
caaaaggccgtggccgacaagtggctctcgattaccggcatcccgatcgtcgagggctac
ggcctgtccgagacctcgccggtggtcaccgcgaaccgctgcgacatcaccgactttacc
ggcaccatcggcctgccgctgccttcgaccgagatccgcatcctggacgaagccggcaac
gaggtcccgttcggcaccgccggcgaaatcgcggtgcgcggcccgcaggtgatggccggc
tactggcagcgcgacgacgaaaccgccaaggtcatgaccccggacggcttcttcaagact
ggcgacatcggcatcatggacgagaagggctatacccgcatcgtcgaccgcaagaaggac
atgatcctggtctcgggcttcaacgtgtatccgaacgagatcgaaggcgtggtcgcggcg
atgccgggcgtgctggaagtggcctgcgtgggcgtgccggacaagaattcgggcgaggcg
gtcaagctgtacatcgtcaagaaggatgccgcgctcaccagcgagcaggtcatggccttc
tgcaaggagcagttcacgggctacaagcggcccaagtacgtggagttccgcgagacgctg
ccgaagaccaacgtgggcaagatcctgcggcgcgagctgcgcgacgagaagacctcggcc
tga
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