Microbulbifer variabilis: MJO52_00640
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Entry
MJO52_00640 CDS
T08656
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
mvb
Microbulbifer variabilis
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvb03000
]
MJO52_00640 (rtcR)
Transcription factors [BR:
mvb03000
]
Prokaryotic type
Other transcription factors
Others
MJO52_00640 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
MCM
AAA
ABC_tran
AAA_19
NTPase_1
AAA_16
AAA_22
AAA_30
AAA_2
NACHT
ATPase_2
AAA_18
AAA_29
AAA_7
ResIII
T2SSE
AAA_14
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
USD21682
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Position
complement(138152..139750)
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AA seq
532 aa
AA seq
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MKTVAISILGTTKDRRGKSDKRWNKWRPNISMCQHDDLLIDRLELLFDNHSKNLADQVTE
DIARISPETNVVHHRVNFNDPWDFESVYSNLLDFARDYAFKPDQEQYLVHITTGTHVAQI
CLYLLTEAGYFPGRLLQTSPAQKNSNLPGQYQIIDLDLSKYDQIASRFQREHQEGTTYLK
GGIETNNQAFNQMIEQLEQVSIRSDAPILITGPTGAGKSQLAQRVYELRKQRGKLEGGLV
AVNCATLRGENAMSALFGHRKGAFTGATTHRPGLLMEADKGLLFLDEIGELGLDEQAMLL
RAIEHKRFMPFGSDKEVSSHFQLIAGTNRDLIQLSREGKFRADLLARIDLWTYRLPSLRE
RIEDLEPNIDFELEAFSTKSGHLVSFNKAARERYLNFGRSGEASWSANFRDLNASILRMG
TLADGGRITTQVVEEEIHRLQIKWQSPQIKSSLPFARIETLLGRDRIEQMDYYEQIKLAG
LIQVCEESNSMAAAGRKLFQVSRTAKKSNNDSHRIRQLLDKYGLKFDQLNKT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtagctatcagtattctcggcacgactaaagaccggcgcggtaaaagtgac
aagcgttggaacaagtggcgccccaatatctctatgtgccagcacgatgacctgctgatc
gatcggcttgagctccttttcgacaaccactcgaaaaacctggcagaccaggtcactgag
gacattgcacgtatttcccctgaaaccaacgtggtccatcaccgggtcaacttcaatgac
ccctgggatttcgagagtgtgtacagcaacctgctggatttcgcccgcgattacgctttt
aagccggatcaggagcaatacctggtacatattacaactggcacccacgtggcccagatc
tgtctctacctgctcacagaggccggttatttccctgggcgcctgctgcaaacttctcca
gcacagaaaaacagtaatttgccgggtcagtaccagattatcgatttggatctatccaag
tacgaccagattgcctcacgtttccagcgagaacaccaggagggcactacctacctgaaa
ggcggtatcgaaaccaacaaccaggcctttaaccagatgatcgagcagttagagcaggtc
tctattcgctccgatgcgcccattctcattacaggaccaacgggggcaggaaaatcccag
ctggcccagcgtgtctatgagttacgtaaacagcgtggaaaattggaaggaggcctggta
gcagtaaactgtgccaccctgcgcggtgagaatgccatgtccgccctattcggccaccgc
aaaggggcctttaccggtgccaccacacaccgccctgggctattaatggaggcggataag
ggcctgctatttctggatgagattggcgagttgggactggacgaacaggcaatgctactg
cgggccatagagcacaagcgctttatgccctttggctcagataaagaagtgagcagtcac
ttccagttgatcgccggcaccaaccgggatctaatacagctcagtcgcgagggtaaattt
cgtgcagacttgctggcccgtatcgacttatggacctaccgcttgccctctctgcgtgag
cgtattgaagacctggaacccaatatcgactttgagcttgaagccttctccacaaagtct
ggccacctggtgagcttcaataaagcggcgcgggagaggtacctgaactttggccgctcg
ggagaggccagctggtcagcgaactttcgcgatcttaacgccagtatcctgcgcatgggc
accctcgccgacggcgggcgtatcacgacccaggtagtggaggaggaaattcacagatta
cagattaagtggcaaagcccacagattaagtcatcactgccctttgcccgtattgaaacg
ttgttgggccgtgaccgcatcgaacagatggattactacgagcagatcaagctggcggga
ctgattcaagtttgtgaggagtccaactctatggcggcggccgggcgcaaactgttccaa
gtgagccgcacagcaaaaaaatccaataacgactctcaccggatacgccaacttttagat
aaatacggtcttaaattcgaccaactgaataaaacatag
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