Microbulbifer variabilis: MJO52_02660
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Entry
MJO52_02660 CDS
T08656
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mvb
Microbulbifer variabilis
Pathway
mvb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MJO52_02660 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvb03021
]
MJO52_02660 (rpoA)
03400 DNA repair and recombination proteins [BR:
mvb03400
]
MJO52_02660 (rpoA)
Enzymes [BR:
mvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MJO52_02660 (rpoA)
Transcription machinery [BR:
mvb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MJO52_02660 (rpoA)
DNA repair and recombination proteins [BR:
mvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MJO52_02660 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
USD22056
LinkDB
All DBs
Position
592774..593778
Genome browser
AA seq
334 aa
AA seq
DB search
MQTAVNEFLTPRRIDVTEYNPNHAKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVEHEYSAIEGVQEDVIEILLNLKEIAVVMHGKDQAVLSLSKKGPGAVTAGDIQVDHD
IEIVNPEHVIANITGDVELNLRLTVARGRGYQPADARRDEEEESRAIGRLQLDASYSPVR
RVSYSVESARVEQRTDLDKLVLDLETNGTLDPEEAIRRAATILQQQLAVFVDLEGEKDAQ
PKAEEPEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLKGDSKLSPL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgctgtcaacgagtttttgacaccgcgtcgtattgacgtcaccgagtacaat
ccgaatcacgccaaagtggttctggagcccctggagcgtggtttcggccacactcttggc
aatgcgctgcgtcgcatcctgctgtcctccatgccgggctgcgccgtcaccgaagtagaa
atcgacggtgtcgagcacgagtacagcgcgattgaaggtgtgcaagaagatgttattgaa
atcttgctcaacctgaaagaaatcgcggttgttatgcacggcaaagatcaggcggtatta
agcctgagcaagaagggcccgggtgcagtgaccgctggagatatccaggtagatcacgat
atcgagattgtgaatcctgaacacgtgattgccaatatcacaggtgatgtagaactcaac
ctgcgactcactgttgcgcgtgggcgtggttatcagcccgccgatgctcgccgtgatgag
gaagaggaaagccgcgcgattggccgtctgcagctggacgcatcttacagcccggttcgc
cgtgtatcttacagcgtggaaagcgcgcgtgtagagcagcgtaccgatctggataagctg
gttttggacctggagaccaatggtactctggacccagaagaagctattcgtcgtgcagcc
actattctgcagcaacagctggcagtatttgtggacctggaaggcgagaaagatgcgcaa
ccgaaggcggaagagcccgaagttgacccagtattgctgcgcccggttgacgacctggaa
ctcaccgtacgttcggctaactgtctgaaagcggaaaacatctactacatcggtgacctg
attcagcgcactgaagtagagctgctgaagactccgaaccttggcaagaagtctctgact
gaaatcaaggatgtactggcttcccgtggtttgtcactgggtatgcgtctggaaaactgg
ccaccggccagccttaaaggcgatagcaaattaagccccctgtaa
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