Microbulbifer variabilis: MJO52_06260
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Entry
MJO52_06260 CDS
T08656
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mvb
Microbulbifer variabilis
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvb03016
]
MJO52_06260
Enzymes [BR:
mvb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MJO52_06260
Transfer RNA biogenesis [BR:
mvb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MJO52_06260
Prokaryotic type
MJO52_06260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
USD22735
LinkDB
All DBs
Position
1421222..1422184
Genome browser
AA seq
320 aa
AA seq
DB search
MSEVWNLNWPRALGGAAISADFRTVAEDFVVDEMAFPEPTEGGEHVYLHIKKRGANTVWV
AKQLAKLAGVRPLDISYFGLKDRHAVTTQWFSVWLGQKPEADWSQINSEEVSLLRFFRGG
RKLRRGEHVGNRFKIRLRNVNGDRAAAEEVLKQVGGGVPNYFGEQRFGIDGGNLNLARHL
AEEEGRCRKNEKAFAMSAARSWLFNQVLAERITQDCWQQSIEGEPQSEPSGPLWGRGRNL
ATGPQGELEQQVLEKWLSWCNWLEHCGLKQERRPLALRPEAFRFEWQSDDLLLEFALPPG
AFATALLREVAQLVNVNSDT
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtctggaatctaaattggccccgtgctttgggtggggcggcaatctctgct
gattttcgtactgttgcggaagattttgttgtcgatgagatggcctttcccgaacctaca
gagggcggggagcatgtgtacctgcatattaagaagcggggggccaatactgtctgggtg
gcaaaacagctagccaaactcgccggagtgcgccctctggatatcagctactttgggttg
aaggatcgacatgccgtaaccacgcagtggtttagtgtttggctcgggcagaagccagag
gcagattggtcgcagatcaatagtgaagaagtttcacttctgaggttttttcgaggcggc
cgtaaactacgtcgcggggagcatgtaggcaatcgatttaaaattcgcctgcgcaatgta
aatggtgatcgggcggctgcggaagaggtacttaaacaggtaggcggcggagtgccaaat
tacttcggtgagcagcgctttggtatcgatggcggcaacctgaacctggcgcgtcacctg
gcggaagaagagggacgctgtcgtaagaatgaaaaggcctttgccatgtcggctgcgcgc
agttggctatttaatcaggtattggcagaaagaatcactcaagactgctggcagcaaagt
attgagggtgagccacaaagtgagcccagtggccctttgtgggggcgcggtagaaacctc
gccacaggtcctcaaggcgaattggagcagcaagtactagagaagtggctgagctggtgt
aactggctggaacattgcgggctcaagcaagagcgaagaccactggccctacgtccagag
gcctttcgttttgagtggcagtctgatgacctcctcttggaatttgcgttgccgcctggg
gcattcgcaacagccttgctaagggaggtggcacagctggtcaatgtgaactcggacaca
taa
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