Microbulbifer variabilis: MJO52_06280
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Entry
MJO52_06280 CDS
T08656
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mvb
Microbulbifer variabilis
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvb03021
]
MJO52_06280 (rpoS)
Transcription machinery [BR:
mvb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJO52_06280 (rpoS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
TetR_N
Motif
Other DBs
NCBI-ProteinID:
USD22739
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All DBs
Position
1425025..1426074
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AA seq
349 aa
AA seq
DB search
MEAQRQDQSMTGQAEDFPPELAVENDEQKLNSEKGKSSGRTRRNAAKNNSVSSPTEKSRV
SRLDGDGHLQKNLDATQLYLNEIGFSPLLTAEEEVYYARKALRGDAASRKRMIESNLRLV
VKIARRYVSRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQT
RTIRLPIHVVKELNVYLRASRELAQKLDHEPSAEEIANLLEKPVEDVERMLGLNERVTSV
DTPIGPSSEKTLVDTIPDQQESDPAELLQDSDLFDSINRWLGELPDKQCEVVSRRFGLRG
FEASTLEEVGREIGLTRERVRQIQVDALKRLREVMEKQGLDGQSLFGNL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacaacggcaagaccagtccatgactggccaggcagaagactttcctcctgag
ttggcggtagagaatgatgagcagaaactaaattccgaaaaaggtaaaagtagtggccgt
acgcggagaaatgcggcaaaaaataactccgtttcctcccccacagagaagagtcgggtt
agcaggttggatggcgatggccatttacagaaaaacctggatgccacccagctctatctc
aatgaaataggcttttcccccctactgaccgctgaagaagaggtttattacgcacgcaag
gccttgcgtggtgatgctgcatcaagaaagcgtatgatcgagagtaacctacgccttgtt
gtaaaaatcgcccgtcgctacgttagtcgtggcctcgcattgttagacctaatcgaagag
ggcaacttggggttaattcgcgctgttgagaagtttgatccggagcgaggtttccgcttt
tctacttatgctacttggtggatacgtcagacaatagaacgagccattatgaatcagact
cgtactattcgcctgccaatccatgtagtaaaagagttaaatgtgtatcttcgagcatct
cgtgagcttgcacagaagctggatcacgagccatctgcagaagagattgctaacttgttg
gagaaaccagtagaggacgtcgaacggatgctggggctcaatgagagagtcacctccgta
gatactcctataggcccttcttccgagaagacgttggttgatactatacccgaccagcag
gagtctgatccggcagaactccttcaggatagcgaccttttcgatagcattaatcgctgg
cttggtgagcttcccgataagcagtgtgaagttgtatccaggcgcttcggattacgtggc
tttgaggcgagcactctagaagaagttgggcgtgaaattggtctcactcgtgaacgggtt
cgccaaatccaagttgatgcactgaaacgtttaagggaagttatggaaaagcagggactt
gacgggcaatccctgtttggaaatctctaa
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