Microbulbifer variabilis: MJO52_09010
Help
Entry
MJO52_09010 CDS
T08656
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mvb
Microbulbifer variabilis
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvb03019
]
MJO52_09010 (hrpB)
Enzymes [BR:
mvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MJO52_09010 (hrpB)
Messenger RNA biogenesis [BR:
mvb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MJO52_09010 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_19
HA2_N
CON_HrpB
AAA_30
AAA_22
nSTAND3
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
USD23259
LinkDB
All DBs
Position
complement(2012709..2015285)
Genome browser
AA seq
858 aa
AA seq
DB search
MPELPIYSALPELFKALEIHNNVVLQAPPGAGKTTVVPLALLETDWLGQRNIIMLEPRRL
AARTAAARMAAQLGEKLGETVGYQVRGERRRSAKTRILVVTEGILTRLLQSDPELSETSL
VIFDEFHERSLQADLSLALCLQSQEYLREDLKLLVMSATLETEAVARVLGGAPVVSSEGR
SFPVHIDYLGQREEPEDHRSMPALMSRKIFEALRKESGSVLAFLPGVSEIRKVEELLREQ
LASADDLKPDSIILAPLYGDLTREQQDQAIAPAAPDQRKVVLATNVAETSLTIEGIRIVV
DSGLMRESRFDPNSGMNRLETCRISQASATQRSGRAGRLSEGFCLRLWSEGRQRSLSSKN
TPEIIRSDLAPLALELAQWGVSDPTELSWLDLPPTGPLAQAQALLKQLGALDQDLRITPH
GSAMLTLGCHPRLAHMMLRSLDWHLSQQACLLAALLSERDIFRGEARWDRDISKRIEALQ
AHSKGQNIDRGAVQRIRQQANTWQGQLKDFKPQEPRNSDSIDQADRIGVLLGLAYPDRIA
KSRQDSARRYLLCSGRGAYFSHEDALALGDFLVVAELDGLGRDARIQLAAPISKNALQRC
FADQIELNTTIRWDDTAGRAEALEQVILGKLVLQQQVAKDVPSELLSRALLDAIRQKGLS
LLPWSKEALQFRARVEFLRTEESGQSLLGDTPLPNLSDDTLLQDLERWLLPHLHGFHKFE
QLKQLDLLNILRAQLDWAHIQQVDELAPSHYTVPSGSRIAIDYEASPPILAVRLQELFGL
AQTPAVLRGGYPLMIHLLSPARRPVQITRDLANFWANTYEEVKKELRIKYQKHYWPDDPR
TAVATNKTKKRMDNPRGS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttaccaatttattccgccctaccagagttattcaaagcactggaaatacac
aacaatgtggtactgcaagctcctcctggcgcaggcaagactaccgttgttcccttggcc
ctgctcgaaaccgattggttggggcaacgcaatatcattatgttggagcctcgtcgcctg
gctgcgcgcacggctgcggcacgtatggctgcccagctcggagagaagctaggcgagact
gtgggttaccaggtacgcggggaacggcggcgaagtgcgaaaacccgtatcctggttgtt
accgaaggtattcttacccggctgctgcagtctgacccggaactgtcagaaacctcgctg
gttatttttgatgagtttcacgagcgcagtctgcaagccgacctatccctggcactgtgc
ctgcaatcccaggaatatctgcgcgaagacctgaaactattagtaatgtctgcaaccctg
gaaaccgaggcggtagccagggtgctcggcggtgcgccagtggtcagtagtgaggggcgc
agcttccccgtacatatcgattaccttggtcagcgggaggagccggaagatcaccgctct
atgcccgcgctcatgagtcgcaagattttcgaagcacttcgcaaagagtcaggcagtgta
ctcgcatttcttccgggagtttcagagattcgcaaggtagaggagttactgcgcgaacaa
ctcgcctctgcggatgatctcaaaccagatagtattattctcgccccactctatggagac
ttgacccgcgaacagcaggatcaggccatcgctccggccgctcccgatcaacgcaaagtg
gtgctagcaaccaatgtggcagaaaccagcctgacgattgagggaatccgcatagttgtg
gattccggcttaatgcgagagtctcgcttcgatcctaacagcggtatgaatcggctggag
acctgccgaatctcacaagcctctgccacccagcgcagcggccgcgccgggcgcctcagc
gaagggttctgcctgcgactgtggagcgagggccgccaacgcagcctcagcagtaaaaac
acccccgaaataatacgcagcgatttggcccccctggcgctggaattagcccagtgggga
gtcagtgatcccaccgagctgagctggctggaccttccccccacaggtcctctagcccaa
gcccaggcactattaaagcaactgggcgcactagaccaagacttgcgcatcactccacac
ggcagcgccatgctcaccctgggttgccatccacgcctcgcccatatgatgcttcgcagc
ctcgactggcatctatcacaacaggcctgcctactcgcggcgctactgtcagagagggat
atcttccggggagaagcacgctgggatagagacatcagcaaacgtatcgaagcactacag
gcccattctaaggggcaaaatatcgaccgcggtgcggtgcaacgtattcgccagcaggcc
aacacttggcaggggcaattaaaggatttcaagccgcaagaacctcgtaacagcgatagc
attgaccaggccgatagaatcggggtgctattggggctcgcctatccggatagaattgcc
aaaagccgccaagatagtgcacgccgctacctgctttgcagcggccgaggcgcatatttc
tcgcacgaagacgccctggctctcggcgacttccttgtggttgccgaactggatggactg
gggcgcgatgcgagaatccagctggccgctccaatttcaaaaaacgccttacagcgctgt
tttgccgaccaaatcgagctaaataccactattcgctgggatgataccgccgggcgtgcc
gaagccctggagcaggtcatactgggcaaactagtgctgcagcagcaagtcgccaaagat
gttccatcagagttattgagccgggcactactcgatgccattcgccagaaaggactctcg
ctactgccctggagtaaagaagccctgcaatttcgcgcacgagtggaatttttgcgaaca
gaggaaagtggtcaatctctactgggagacactccgctacccaacttgagtgatgatacg
ctgttgcaggaccttgagcgctggctattaccgcatctacatggcttccataaatttgag
cagctcaagcagctggacctgctcaatattctgcgcgcacaactcgactgggcccatatt
cagcaagttgatgagctggctcccagccactacaccgtacccagcggctcacgcattgct
atcgattacgaagcatccccaccaatcctggcagtgcgcttacaggaactcttcggcctg
gcacaaacccccgcagttttgcgtgggggatacccgctaatgattcacctgctctcccct
gctcgtcgcccggtacagatcactcgcgatctggctaatttttgggcaaacacctacgaa
gaggtcaaaaaggagttgcgtatcaaatatcagaagcactactggccagatgacccccgt
accgcggtcgccaccaacaagactaaaaagagaatggataaccccaggggctcctaa
DBGET
integrated database retrieval system
