Microbulbifer variabilis: MJO52_10380
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Entry
MJO52_10380 CDS
T08656
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mvb
Microbulbifer variabilis
Pathway
mvb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MJO52_10380 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvb03400
]
MJO52_10380 (xthA)
Enzymes [BR:
mvb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MJO52_10380 (xthA)
DNA repair and recombination proteins [BR:
mvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MJO52_10380 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
USD23522
UniProt:
A0ABY4VM46
LinkDB
All DBs
Position
complement(2326963..2327778)
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AA seq
271 aa
AA seq
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MKVVSFNVNSIRTRLHQMQALVDSHQPDIIGLQETKVTDEDFPVDAIRDLGYELIYFGQK
THYGVALLSRLPFIDREYGFPTDDDNAQRRMVMGKFDIGGSKPLTVINGYFPQGENREHP
VKFPAKQKYYADLDTYLQTTCDPEAPVLVIGDMNISPSDQDIGIGEPNRKRWLRDGKCSF
LPEEREWLQKIEAWGLADTFRAMNPDTDDVFSWFDYRSKGFDREPKRGLRIDLIMATSPL
MEHCVATGVDYDIRAMERPSDHAPVWAEFKL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtttcctttaacgtcaacagtattcgcactcgcctgcaccaaatgcaggct
ctggtagatagccatcaacccgatatcattggtctccaggaaaccaaggtcaccgatgag
gactttcctgtagatgccattcgcgacctgggttacgagctaatctattttggccaaaaa
acacactacggtgttgccctgctctcacgcctaccatttatcgatcgcgaatatggcttt
cctaccgacgacgataacgcccagcgccgtatggtcatgggaaagttcgatattggcggc
agtaaacctctcaccgtcatcaacggctactttccccagggcgagaatcgtgaacaccca
gtaaaattcccggcgaagcaaaagtactacgctgaccttgatacctatctacaaaccacc
tgcgatcccgaagccccggtgctggttattggcgacatgaacatctctccgagtgatcaa
gatatcggtatcggcgagcccaatcgcaagcgctggctgcgcgacggcaagtgcagcttc
cttccagaagagcgcgaatggctgcagaaaattgaggcctggggcttggcggatactttc
cgtgcgatgaatcctgatacagatgatgtatttagctggtttgactatcgcagtaagggt
tttgaccgcgagcccaagcgtgggctgcggatcgacttgattatggccacaagccctctg
atggaacattgtgtggccacaggggtagattatgatatccgcgctatggagcgcccctca
gaccatgcgccggtctgggcagagttcaagctctaa
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