Microbulbifer variabilis: MJO52_10630
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Entry
MJO52_10630 CDS
T08656
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mvb
Microbulbifer variabilis
Pathway
mvb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MJO52_10630
09124 Replication and repair
03420 Nucleotide excision repair
MJO52_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvb03021
]
MJO52_10630
03036 Chromosome and associated proteins [BR:
mvb03036
]
MJO52_10630
03400 DNA repair and recombination proteins [BR:
mvb03400
]
MJO52_10630
Enzymes [BR:
mvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MJO52_10630
Transcription machinery [BR:
mvb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MJO52_10630
Chromosome and associated proteins [BR:
mvb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MJO52_10630
DNA repair and recombination proteins [BR:
mvb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MJO52_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
USD23570
LinkDB
All DBs
Position
complement(2389649..2392183)
Genome browser
AA seq
844 aa
AA seq
DB search
MVTALRGKPTVAGLLAEPTEEHNTSASASPLKLSVGELVAFSCRRGDLIHTGGPGPTAQE
GIRAHQKLQKRRPKGAEAEYRLQVQLECSGQDILLEGRVDILHPQADLHQPAQLDEIKTT
YCHPDKLPETTRLYHWAQLKIYGFCYLLQQRQKGSSVEEVSLQMVWYNLKEKKSYPEQSL
FSWEALESFAGDALSLYIHWHRAWQAHRQQVIQTAKSLPFPFPDYRPGQRQLAVSAYRCL
RDAGQLVVEAPTGIGKTISTLFPAIKALGEEKLDQLLYLTAKNSGRQVVRETIAKLHGVG
LKLSLLELRARDTTCACKLGLCSRDDEGTCPRTQGFYDRLPQARKQLLGQPWITPEALAK
VADQWHLCPFELSLQMLPWADLVVCDFNYVFDPLVRISTLQDPRYRRALLVDEAHNLSER
AREMYSASLSRRDSRRAALACKSNHPQLYRRIQSLVRALAQWSKRFQEQNLYKEIRSSQN
VQAWCSPLNSEEDRPTTVSRATQKVLDALSELSEQEKFPPEEIGEWLKSLYRYACIEQIL
SGQHQALTRVIDQDAPWQEHQLKLMCMNAAGFLQESCAQFHGALFFSATLRPTQFVTAQL
GIEPETPYLMLPSPFEASHQGVFLCPFVDTRYQARQSALPALVDLIARVYFSRPGNYLVF
FPSYRFLQMVVEHFQKDYPEIQPLQQTPGASDREREAFLASFSEGAQSLGFAIMGGVFAE
GIDFVGEKLIGTIIVGTGLPQVNEEQELLRQSAEHPQTPSAVNGFDIAYRYPGMTRVLQT
AGRVIRTESDRGVIILADYRFADMFYQNLYPKHWQIQTSKSGEQLSQQLGCFWNRQYLNE
CTVE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggttacagccttgaggggtaagcctacagttgcagggctactggcggagcctactgaa
gagcataacacctccgcaagcgcctctcccctaaagttatctgtgggtgaattagtggct
ttctcttgccgcagaggggatttgatccataccggcgggccaggcccaaccgcccaagag
ggcattcgcgctcaccaaaaactgcaaaaacgtcgccccaaaggcgcagaagcggaatac
cgtttacaggttcagctggagtgctcaggccaggatatcctcttggagggacgggtcgat
atccttcatccgcaagctgacttgcaccagccggcacaactggatgaaatcaaaaccacc
tattgccatccagataagcttcccgagaccacccgcctataccattgggctcagcttaaa
atttacggtttctgctatttgctacagcagcgccaaaaagggagttcggttgaagaggtc
tccctgcagatggtctggtacaacctcaaagagaaaaagtcctacccggagcaaagcctg
ttcagctgggaggctttggaaagttttgctggagatgccctcagtctgtatatccattgg
catagggcctggcaggcgcatcggcaacaagtgattcaaacagcaaaaagcctcccattc
cccttccctgattacagacccggtcagcgccagctggcggtatccgcttatcgctgcctt
agggatgcagggcaactggttgtggaggcgcccaccggtattggcaaaaccattagtaca
ctgttccccgctatcaaagcccttggtgaggaaaagctggatcagctgctatacctcacg
gcgaaaaactctggcaggcaggtggtgcgagagactatcgctaagctacatggagttggg
ctaaagctttcactattggagctgcgtgcgcgtgatacgacctgcgcttgcaaactggga
ttgtgtagccgcgatgatgaaggcacctgtcctcgcacacagggcttttacgaccgcctg
ccgcaagcgcgcaaacaactgctggggcaaccctggatcacaccggaagcgctcgcgaag
gttgcagatcagtggcatctctgcccttttgagttgtccttgcaaatgctgccctgggcg
gatttggtggtctgtgactttaattacgtctttgatcctttggtgcgtatttccacatta
caagatccgcgttacaggcgcgcactattggtagatgaagcgcacaacttaagcgagcgc
gcacgggaaatgtacagcgctagtttgagccgcagggatagtcgccgcgcggccctggcc
tgtaaaagcaaccacccacagttgtaccggcgtatccaatccctggtacgcgcacttgct
caatggagcaaacggtttcaagaacaaaacctctataaggaaatacgctcaagccaaaat
gtacaagcctggtgtagcccgctgaattccgaagaggatcgccctacaactgtatctcgc
gctacccagaaggtactagatgcactgagtgaattatctgaacaggaaaaattcccccct
gaagagatcggggaatggttgaaaagtctttatcgatacgcctgcatagaacaaattctt
tctggtcaacaccaggccctgacccgtgtgatcgatcaggacgccccctggcaggaacac
caactaaagctgatgtgtatgaatgccgcgggtttcctacaggaatcttgcgcccagttt
catggagctcttttcttctcagccaccttacgacccacacagtttgtcactgcacagctt
ggaattgagccagaaacgccttacttgatgctgccatcaccttttgaggcttcccaccag
ggagtttttctttgtccttttgtggatacccgctatcaggcccggcaaagtgcactccca
gcactagtggacttgattgcccgagtttatttcagccgtcctggcaattacctggtgttt
ttcccctcttaccgctttctgcaaatggtcgtagagcatttccagaaggattatccggaa
atacagccgctacaacagacgccaggcgccagtgatcgcgaaagagaagccttcctggcc
tcgtttagtgagggtgcacagagcctgggttttgccattatgggcggcgtttttgctgag
ggcattgattttgtaggggagaaattgattggcacaattatcgtaggtacgggtcttccc
caagtaaatgaagagcaagaactgctacgacagtcggcggagcacccacagaccccctca
gcggtcaatgggtttgatattgcctaccgctatcccggcatgactcgggtattgcagaca
gcgggaagagtgattcgcactgagtcagatcggggcgtgattattttggctgactaccgt
tttgcggatatgttttatcaaaacctttatcccaaacattggcaaattcaaacaagtaag
agtggtgaacaactttcacagcaattaggttgtttttggaatcgacaatacttaaacgag
tgtactgtagaataa
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