Microbulbifer variabilis: MJO52_17050
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Entry
MJO52_17050 CDS
T08656
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mvb
Microbulbifer variabilis
Pathway
mvb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJO52_17050 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvb03019
]
MJO52_17050 (pcnB)
Enzymes [BR:
mvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MJO52_17050 (pcnB)
Messenger RNA biogenesis [BR:
mvb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MJO52_17050 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
DUF6932
Motif
Other DBs
NCBI-ProteinID:
USD20758
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All DBs
Position
3840707..3842086
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AA seq
459 aa
AA seq
DB search
MAAVKTDSRMLNNLISSIKRWRKPAKKGPRVIARNDHNISRRDISRAALTVMKRLQEAGY
QAYIVGGGVRDLMLGGHPKDFDVATDATPEQAKVLFRGARIVGRRFRILHARIGREVIEV
TTFRGHHSDGETHEAKQSEHGMLLRDNVYGDLESDAMRRDFTVNALYYTTDGFAVHDYTG
GVEDINNRLIRMIGAPATRYKEDPVRMLRAVRFAAKLDFAIEPATEAPLKELAPLLRNIA
PARLFDEILKLLMSGQGERTFELLRRYHLWQHLFPDNAAQIEKNPAALELTKRALRNTDQ
RIQADMRVTPAFLYAALLWPAVDEEQKKLIEKGIPPAPALAQAAQKITSNQLAHTAIPKR
FSIPMREIWDLQHRLPQRGGSRAQRQLEHPRFRAAYDFLLLREECGEIEPGLGNWWTDFQ
QADDEQRQQMVRKLQRSGGNNRRGRNSRGGRRRKPKAAE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtcaagacagacagccgtatgctcaataatttgattagtagtatcaaacgc
tggcgcaagccggccaagaaaggccccagggttatcgcccgcaacgaccacaatatctcc
cgccgggatatcagccgcgcagccctaacggtcatgaaacgcctacaggaagcaggttac
caagcgtacattgtcgggggcggcgtgcgggatctaatgctcggcggccaccccaaagac
ttcgatgttgccactgacgctacaccagaacaggctaaagtactgtttcgcggcgcacgc
attgtcggtcggcgctttcgaatcctgcacgcgcgtattggccgcgaggttattgaggtc
accacttttcggggccaccacagcgatggcgagacgcacgaagcaaaacaatccgaacac
ggtatgttgctgcgcgacaacgtctacggcgacctggaaagcgatgccatgcgccgcgac
tttacagtcaatgctctctattacaccaccgatggcttcgctgttcacgactacaccggg
ggtgttgaggacattaataatcgcctgatccgcatgatcggggctcccgctacccgctat
aaagaagaccctgtgcggatgctgcgtgcggtgcgcttcgcagccaaactggattttgcc
atcgaacccgctaccgaggccccgctaaaagagctggctcctctactgcgcaatatcgcc
cccgcgcgcttgtttgacgagatcctcaaactgctgatgagcggccagggcgagcgcact
ttcgaactattgcgccgctatcatctgtggcagcacctgttcccagataatgcagcccaa
attgaaaagaaccccgcagcactggagctaacaaagcgcgcccttcgtaataccgaccag
cgcatccaggctgatatgcgcgtgacccccgccttcctatacgctgccctgttgtggccg
gctgtggacgaggagcagaaaaagctcatcgagaaagggattccaccggcgccggcactg
gcccaggcggctcaaaaaattaccagtaaccaactggcccacaccgctattcccaagcgc
ttctctatccccatgcgcgagatatgggatctccagcatcgtctgccacaacgcggcggc
agtcgcgcccagcgccagctggagcacccccgcttccgcgccgcttacgacttcctgcta
ttgcgcgaagagtgtggagaaattgaacccggtctgggcaactggtggaccgactttcag
caagccgatgatgaacaacgccagcaaatggtacgcaaactccagcgcagcggcggcaac
aatcgacgtggccgcaattcccgtggcggacgccgacgcaagccaaaggctgccgaataa
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