Microbulbifer variabilis: MJO52_17105
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Entry
MJO52_17105 CDS
T08656
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mvb
Microbulbifer variabilis
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvb03016
]
MJO52_17105 (truB)
Enzymes [BR:
mvb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MJO52_17105 (truB)
Transfer RNA biogenesis [BR:
mvb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MJO52_17105 (truB)
Prokaryotic type
MJO52_17105 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
USD20769
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All DBs
Position
complement(3851651..3852592)
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AA seq
313 aa
AA seq
DB search
MGRRPKWGRPVHGVLLLNKPAGITANDALQKAKRLFFANRAGHTGALDPLATGVLPICLG
EATKFSQYLLDADKRYRSTFVFGMTTASGDADGDVLETKDASGLTEKAVLKAMEAFRGSI
KQVPSMYSALKHKGQPLYKLARQGLEVEREAREVEIFEFELLSFTPGAQPRAEVEVHCSK
GTYIRSIAEDLGQALGVGAYVEVLHRSAAGPFDEADAVTLDELTEERGEDKAEVLDHHLL
PMDSPASSLPKLVLPDDSGYYVRQGQPVMDLQVYRIGTEGDMVRLFLENGDFLGVGEITD
EGCVAPRRLVSGT
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcagaccaaaatggggccggccggttcacggcgtgctgttattaaacaagccc
gccggcattaccgccaatgatgcccttcaaaaagctaaacgactcttttttgccaatcgc
gccggtcataccggggccttagatccactggcaaccggtgtgctgccgatctgtctcggc
gaagccaccaagttttcccagtacctactcgatgctgacaaacgctaccgcagcactttt
gtcttcggtatgaccactgccagtggcgatgccgatggcgatgtactggaaaccaaagat
gcttccggtttaaccgaaaaagcagtgctcaaggccatggaagcctttcgcggcagcatc
aagcaggtgccctccatgtactctgctcttaagcacaagggtcagcccctatataagctg
gcgcgccagggcttggaagtggaacgcgaagcgcgggaagtggaaatttttgagtttgaa
ctgctgagctttacgccgggcgcacagcctcgtgcggaagttgaggtgcactgttccaag
ggaacctatattcgcagtattgccgaggacctgggtcaagctctgggtgtaggcgcctat
gtggaagtactgcaccgcagtgccgccggccccttcgatgaagccgacgcagtgaccctg
gatgagcttacagaagaacgcggtgaagataaggcagaagtgctcgatcaccacttgttg
ccgatggattctccagcgtcttcactgcccaaactcgtcctgccggacgactctggttac
tatgtgcgtcaggggcaaccggtaatggatttgcaggtctaccgtatcggtacagaaggt
gatatggtgcgcctcttcctggaaaacggtgattttctgggcgtaggagaaattaccgac
gaagggtgcgtggcaccacgacgtctggtaagtggcacctga
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