Microbulbifer variabilis: MJO52_19260
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Entry
MJO52_19260 CDS
T08656
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mvb
Microbulbifer variabilis
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mvb01002
]
MJO52_19260
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mvb01011
]
MJO52_19260
Peptidases and inhibitors [BR:
mvb01002
]
Cysteine peptidases
Family C82
MJO52_19260
Peptidoglycan biosynthesis and degradation proteins [BR:
mvb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MJO52_19260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Root_cap
Motif
Other DBs
NCBI-ProteinID:
USD21176
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Position
4405873..4407828
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AA seq
651 aa
AA seq
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MSYFNPEQRKRKSLLPLLVLGSLCVSILYYAFSANQKTVPVLPENAVRPHLVHWLEENPD
AWPAQDPIFNPAAVRRIYQRTNYRLLWFDNYNLSDSANDLLKQLTAASSGNPSSMVDYRY
HLGYFDRTLRDTPQRLQMAAVLDILLTDAFVSYAQDTQLDRITPKSRPRRGITPVLREHQ
GFRMVAFGNAPQQASNEPSGRKYFRGYDRARMIGSKPRSRYYSRDYNTDNQRSSSRPSDT
RRYRTRYNTSSDSGSSGTTRGGSRVYYNQGRNSHPQERTRAARSENSEGPYFEENTPYGS
DVYALRNELERLRRISDSGRWRPIPPGPVMTMGARHPHVARLRELLTLYGDYQSRYSYGG
GDPNRFDRGLHEALLRFQKRHGLKPDGIVGRGTRKRLNLSPSARAKIVEMNILRREELPA
SLGDRFIQVNIPAYRLQYVENNRVKLAMNVVVGKKKHATPEITTRVSKVVFNPTWTVPRS
ILVNEILPKARKNPAGMENMGYRVVNGRGEHLPLTASNLSAAGAGSFLMRQMGGEENILG
RVKFEIPNKHDIYLHDTRARTLFSLTDRDYSHGCIRLEKPRHLAEALLRPQGDWDQWRID
QLTVGEKTTEVDLVRLVKVYITYWTAWVDGKGRLNFRPDIYRKDGLSDNQF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacttcaacccagagcagcgcaaacgcaaatcattactgcccctgctggtgcta
ggcagtctctgtgtctccatcctctattacgccttttccgctaaccagaaaacggtgcca
gtattgcctgagaatgcagtacgcccacatttggtgcattggctggaggaaaacccagac
gcatggccggcccaagatcccattttcaacccggcggcagtgcgcaggatttaccagcgt
actaattatcgcctgctgtggtttgataattacaacctgagtgacagcgccaatgacctc
ctcaagcagctaacagctgccagctctggcaatccaagcagcatggtggattatcgttac
cacctggggtacttcgaccgcactttgcgggacactccccagcgcctgcaaatggccgca
gtactggatattctgctgacagacgccttcgtctcttacgcacaagatacccagctcgac
agaatcacccccaaaagccgtccgcgccgaggaattacaccggttctgcgggagcaccaa
ggatttcgcatggtagccttcggcaatgccccacagcaggcatccaacgagcccagcgga
cgcaagtactttcgcggctatgatcgggcgcgcatgatcggcagtaaaccacgcagtcgc
tactactcccgcgactacaacactgacaaccaacgcagctcttcaaggccttccgacact
cgtcgctatcgcacgcgctacaacacctccagtgacagtggttcctctggaacgacgaga
ggcggcagcagggtttactacaatcagggccgcaatagtcatccccaggaaagaaccagg
gcagctcgctcagaaaacagtgaggggccctatttcgaagaaaacacgccttacggtagc
gacgtctatgccctgcgaaacgagctggaacgcctgcgcagaatctccgacagtggccgt
tggcgtccgatacctccgggaccggtgatgacgatgggtgctcgccacccccatgtggcc
cgcctgagagaattgctcaccctctacggggactatcagagccgctatagctatggcgga
ggtgaccccaaccgctttgaccggggcctgcatgaagcgctattgcgcttccagaagcgc
cacggcctcaagccagacggaattgtgggccgcggcacacgcaagcgactcaacctatcc
ccctcagcgcgagcaaaaattgttgagatgaatatcctgcgcagggaagagcttcccgcc
agccttggggatcgctttatccaggtgaatatacccgcgtaccgcctccagtatgtggag
aacaaccgggtaaaactggccatgaatgtggtcgtgggcaagaagaaacacgctactccc
gaaatcaccacccgggtcagcaaggtggtattcaaccccacctggacagtgccacgcagt
atcctggtgaatgaaattctgcccaaggcacgcaagaatcctgcgggcatggagaacatg
ggttatcgagtcgtcaatggcagaggggaacacctgccgctgaccgctagtaacttgtca
gccgccggtgctgggtctttccttatgcgccagatgggtggagaggaaaatattttgggg
cgagtgaaattcgaaattcccaataaacacgatatttacctgcacgatactcgcgcccgc
actctcttctctctcacagacagggattacagccatggctgtatccgcctggaaaaaccc
cgccacctggctgaggcccttcttcgccctcagggtgactgggaccagtggcgcatcgac
cagctcactgtcggagagaagaccaccgaggtcgacttagtccgcttggttaaggtctat
atcacctactggactgcctgggtggacggaaagggccggctgaattttcgccccgatatc
tatcgcaaggatggtttgagcgacaatcaattttga
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