Microbulbifer variabilis: MJO52_20750
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Entry
MJO52_20750 CDS
T08656
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mvb
Microbulbifer variabilis
Brite
KEGG Orthology (KO) [BR:
mvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvb03021
]
MJO52_20750 (rpoH)
Transcription machinery [BR:
mvb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJO52_20750 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_3
GntR
DUF7645
CBM_AftD
ImpA_N
UPF0231
Motif
Other DBs
NCBI-ProteinID:
USD21456
UniProt:
A0ABY4VDI1
LinkDB
All DBs
Position
complement(4743403..4744257)
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AA seq
284 aa
AA seq
DB search
MGTSLQPVHTLSPGANLGAYIQTVSSFDVLSAEEEKRLAEDLYYREDINAARQLVMSHLR
FVVHIAKSYSGYGLNQSDLVQEGNVGLMKAVKRFNPEKGVRLVSFAVHWIKAEIHEFILR
NWRIVKIATTKAQRKLFFNLRGQKKKLAWLSNDEAKAVAKDLNVDVAQVHEMEGRLAAHD
AAFDAGVDDDDDTAWQAPAHYLEDRSYDPAAQLERDNWQETSFNSLANAMEQLDERSRDI
IQARWLSEEKSTLHELADKYGVSAERIRQLEKNAMKKVRAAMEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccagcctacagccagtgcatacgctgtctccgggcgccaacctgggagcttac
atccagaccgtcagcagcttcgatgtgctgtccgcggaggaagaaaagcgcctggcagaa
gacctctattatcgcgaagatattaacgcggcccgccaactggtcatgtcccacctgcgc
tttgtcgtacatattgccaagtcttattctggctatggactcaaccagtcggatctggtg
caggaaggcaatgttggtctgatgaaggcggttaaacgctttaaccccgagaaaggggta
cgtttggtctcctttgcggtgcactggatcaaagcggaaattcacgaatttatcctgcgc
aactggcgcatcgtgaagatcgctaccaccaaggcacagcgcaagttgttcttcaacctg
cgtggtcagaagaagaaactggcctggctgagcaacgatgaagccaaggcggtggctaaa
gatttgaatgtagatgtcgcccaggtccatgagatggagggccgccttgccgctcatgat
gccgcatttgatgcgggggtggacgacgatgacgacaccgcctggcaagcgccggcacac
tacctggaagaccgcagttatgacccggcagctcagctggagcgggataactggcaggaa
accagcttcaacagcctggccaatgctatggagcagctcgacgagcgcagccgcgatatt
atccaggcgcgctggctgagcgaggagaaatccactctgcacgagctggcagataaatac
ggagtctccgccgaacgtatccgtcagctggagaagaacgccatgaaaaaagtgcgtgcg
gctatggaggcctga
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