| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
mvc Methanosarcina vacuolata
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mvc00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSVAZ_0102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mvc03019]
MSVAZ_0102
03400 DNA repair and recombination proteins [BR:mvc03400]
MSVAZ_0102
Enzymes [BR:mvc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSVAZ_0102
Messenger RNA biogenesis [BR:mvc03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSVAZ_0102
DNA repair and recombination proteins [BR:mvc03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSVAZ_0102
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
90158..93058
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| AA seq |
966 aa
MTSLDLLGFIFWRDIDSTGQGDSKTSTEYDFLKASKRELEPMPSLSARMHSTLHQYFGYT
SFRPLQEAIIRDVLERKDVFVLMPTGGGKSMCYQLPALLMEGVTVVVSPLISLMKDQVDG
LEANGIAAACMNSTQSARENRDVKTAFLENRLKVLYVAPERLMMPGTLAFLKKGKVSLFA
IDEAHCISEWGHDFRPEYRKLKLLRDPKTGFPDIPIIALTATATERVREDIISQLNLHLP
PEKGPYVASFNRKNLYYEVRPKKETFSEITDYLRRHRGEAGIIYCQSRNSVEALTKKLNI
AGFRALPYHAGLSDSERNRNQEMFIKDDVDIIVATIAFGMGIDKSNVRFVIHYDLPRNLE
SYYQETGRGGRDGSPCECILFFSRGDRFKIEYFISQKTNEKEKDISLVQLRQMVAYCEVN
KCRRQTLMEYFGEELPEPCGNCDCCLTPKDTFDGTEAAKKLITCVQELNQRFGTNYVIDV
LTGSKNKKIRQNRHERLKSHGSGLEFTKEQWKSLASEMINTGLLDVSGTKYPVLKLNAMS
RKILKGLEQVELVCPEGFAPEAEESFMPSTVTGTKGKKADDLSFSEEETFSDKFSVASDI
LKASEAKKAIISGKEPDPILFERLRALRKEIALQKNLPPYIIFSDTSLKEMATRFPQTSE
EFHSITGVGEHKLRKYGDVFLKEIENYCTDYSLVPAEKPAEKSIEKPVEESAETPVEKSI
KTPVEKSIEKSIEKSIEKPVEKSIETPVEKLEATCKDPEQEGINSKETAQNAQNDENPKV
EIEMFGTNISDPETDKINSLEVCNLSTKKTRYLDTSIQDWSERNSSAGGFREIDTAEISP
ELEVVNATIADPSISGSFETDSMQRTFSLFTQGFGIDEIADIQGMSIRAVFRQLEQLTLF
GNVRNIGGLLPPKRQQQIKASLESLEVELNSLLRARLGENCQEEEMKFVRALLLSRICFS
QSEGGK |
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| NT seq |
2901 nt +upstreamnt +downstreamnt
ttgacttccctggatcttctggggtttatattctggcgtgacattgattctacaggtcag
ggggattcgaaaacgagcactgagtatgatttcttgaaggcaagtaaacgtgagcttgag
ccaatgccttccctgtccgccagaatgcattcaacccttcaccagtatttcggatacact
tcctttcgcccgttgcaggaggcaattatcagggatgttctggaaaggaaagacgttttc
gtgctcatgcctaccggcgggggcaagtcgatgtgctaccagttgcctgcccttctcatg
gaaggagttactgttgttgtttctcctcttatctctctgatgaaagaccaggttgatgga
cttgaagcaaacgggattgccgcagcctgcatgaacagtacccagagcgccagagaaaac
cgtgatgtaaagacggcttttctcgaaaaccggttaaaagttctttacgttgctcctgaa
aggcttatgatgccagggacccttgcttttttaaagaaaggaaaggtcagtctttttgcg
attgacgaagctcactgtatttccgagtggggccatgattttcggcctgagtacagaaaa
ttgaaacttttgagagatcctaaaacaggctttcctgatatcccaattattgcgcttacg
gcaacagccacagaaagggtccgagaagatatcatatcgcaactcaatcttcatcttcct
ccggaaaaaggtccgtatgtggccagtttcaaccggaaaaacctttactatgaggtcagg
ccaaaaaaagaaactttttccgagattactgactacctgcgcaggcatagaggtgaagcg
ggtatcatctattgccagagccgaaatagtgtcgaagcacttacaaaaaaactgaacatt
gcaggtttcagggcccttccctaccatgcagggctttcagactccgagaggaaccgaaac
caggagatgttcattaaagatgacgtggacatcatagtagctacaatcgcttttgggatg
gggattgataagtccaatgtacgttttgtaatacactatgaccttcccagaaatcttgag
agctactatcaggagaccggcagaggaggaagggacggaagcccatgcgaatgtatcctt
tttttcagcagaggagaccgtttcaagattgagtactttatctcacagaagacaaatgaa
aaggagaaggacatttctctggtgcagttaaggcaaatggtagcttattgcgaggtaaat
aagtgcaggcgccagactttgatggagtactttggtgaagagctcccagaaccctgcggg
aattgtgactgctgccttactcctaaagatacctttgacgggactgaagctgcaaaaaaa
ttgataacctgcgtccaggaactgaaccagcgctttggcactaactatgttattgatgtc
ctcacaggttcaaagaataaaaagatcaggcaaaaccgtcatgaaaggttgaaaagtcat
ggcagtggcctggagttcacaaaagaacaatggaaatcattagcttccgaaatgataaat
accggtcttctggacgtaagtgggacaaagtatcctgtattgaagcttaatgccatgagc
agaaaaatactgaaagggctggaacaagtagagcttgtctgccccgaaggttttgctcct
gaggctgaagaaagtttcatgccttctacggtaactggtacaaaaggcaaaaaagccgac
gatctaagtttctctgaggaagaaactttttcagataaattttcagttgcttctgacatc
ctcaaagcttcagaggcgaaaaaagctataatctccgggaaagagcctgatcctattctt
tttgaacggttaagagctctgagaaaggaaattgctctacagaaaaatcttcctccctac
attattttttctgacacttcccttaaggaaatggctacaagatttccgcaaacttctgag
gagtttcattctattacaggggttggagaacataaattaagaaaatacggggatgttttt
ctcaaggaaatcgaaaactactgcacagattacagtttagtacccgctgaaaaacctgct
gaaaaatctattgaaaaacctgttgaagaatctgctgaaacacctgttgagaaatctatt
aaaacacctgttgaaaaatctattgaaaaatctattgaaaaatctattgaaaaacctgtt
gaaaaatctattgaaacacctgttgaaaaattagaggctacctgtaaagaccctgaacaa
gagggaataaactcaaaagaaactgctcagaatgctcagaatgatgaaaatcccaaagtt
gagatcgagatgttcgggactaatatctccgaccccgaaactgacaaaatcaacagtttg
gaagtttgcaacttatccacaaaaaagacaaggtatctggatacgagcattcaggactgg
tcagagcggaattcttcggcaggcggcttcagggaaatagatactgcagagatatcgcct
gaattagaggttgtaaacgccaccatagcagatccttctatctccggttcttttgaaacg
gattctatgcaaagaactttctctctttttacgcaggggtttggaatcgatgagattgct
gacatccagggtatgagtatcagagccgttttcaggcaacttgaacagctcactcttttt
ggaaacgtaagaaatattggagggctcttacctcccaaaagacaacaacagatcaaagct
tccctggaaagcttagaagttgagctaaactctctgcttcgggcaaggttgggtgagaac
tgccaggaagaagaaatgaaatttgtcagagctctccttctgtccagaatctgcttttcc
cagtctgaaggtggtaagtaa |
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