Methanosarcina vacuolata: MSVAZ_0212
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Entry
MSVAZ_0212 CDS
T03815
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSVAZ_0212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvc03000
]
MSVAZ_0212
03021 Transcription machinery [BR:
mvc03021
]
MSVAZ_0212
Transcription factors [BR:
mvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MSVAZ_0212
Transcription machinery [BR:
mvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MSVAZ_0212
RNA polymerase III system
TFIIIB
MSVAZ_0212
RNA polymerase I system
SL1/TIF-1B
MSVAZ_0212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
AKB42481
UniProt:
A0A0E3LGG5
LinkDB
All DBs
Position
complement(229078..229632)
Genome browser
AA seq
184 aa
AA seq
DB search
MEYAITIENVVASTTLAEDFDLLKIEAGLEGAEYNKAKFPGLVYRTENPKAAFLIFTSGK
VVCTGAKTVENAKMAIINLAKILKSIGCEKINSEPEVYIQNIVATADLETNLNLNTIVIA
FGMENVEYEPEVFPGLVYRLESPKVVVLIFSSGKLVITGGKSPEDCEKGLQVIKTEFDNL
GLIY
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgcaataactatagagaatgtggtggcatccaccactctggcggaagatttc
gacctgctgaagatagaggccggactggagggagcagaatataacaaagctaagttccct
ggcctggtctacagaactgagaacccaaaggctgcttttctgattttcacctccggaaaa
gtggtatgtaccggggctaagacggtcgagaacgctaaaatggccataatcaatctggct
aaaatactcaagtccattggctgcgagaaaataaattcagaacctgaggtttatattcaa
aacattgtagcgactgctgatttggaaacgaacctgaacctgaatacaattgtcatagcc
tttggtatggagaacgtagaatatgagccagaggtatttccaggacttgtttacaggctt
gagtctcccaaggtagtagtgctcatattcagctctggcaaactggtgatcacaggaggc
aaatctccggaggattgcgagaagggcctgcaggtcataaagacagagtttgataactta
gggcttatttattga
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integrated database retrieval system
