Methanosarcina vacuolata: MSVAZ_0275
Help
Entry
MSVAZ_0275 CDS
T03815
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mvc
Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvc03000
]
MSVAZ_0275
Transcription factors [BR:
mvc03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSVAZ_0275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
HTH_27
HTH_34
HTH_46
DnaD_N
Rrf2
PadR
GntR
ULD
Pch2_N
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AKB42544
UniProt:
A0A0E3Q205
LinkDB
All DBs
Position
complement(318146..318916)
Genome browser
AA seq
256 aa
AA seq
DB search
MVLQTNPQLIHNLEKLGLTENEAKAYVGLVSLREATAREIHELTNVPRAKIYEILKVLAK
KGYLEVRQGSPTYFRAVDPKKVIGEIKNEFLNCAIETLGQLNELSYELPKTSPVWYIQSD
WGIKNRIREIMAGVREELIIFSSNPELLKEFKREIKKLEKTCNLTLIVDELDRFNSLPFE
FKETNKEFTDFMNNIVIDGIQYKEEFFMIADGKESIGVHSAGNKREAVIIKLPIVSYMQK
MIYERVLEPGFIKQDR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggtattacaaacaaatcctcagttaattcataaccttgaaaaactggggctaaccgaa
aatgaagcaaaagcatatgttgggctcgttagtttgagggaggctacagcccgtgagatt
cacgaacttacaaatgtgccaagagccaaaatatatgaaattctgaaggtacttgcaaaa
aaaggctatctggaagtgagacagggatctccaacgtatttccgagcagttgatcctaag
aaggtaatcggagaaataaaaaacgaattcttaaactgtgcaatagagacacttggacag
ctcaatgaattgagttatgaacttccaaaaacttctcctgtatggtacatccagagcgac
tggggaataaagaaccggatacgtgaaatcatggcaggagtaagagaagaattaattatt
ttttcatcaaaccctgagttactcaaggaatttaagcgggaaataaaaaaactggaaaaa
acctgtaatctaactcttatagttgatgaactggataggttcaattcacttccttttgag
ttcaaggaaaccaataaagagtttacggatttcatgaataacattgtaattgacggcatc
cagtataaagaagaattttttatgattgccgatggaaaggaatcaataggggttcacagc
gcaggaaacaaaagagaagcagtgataatcaaattgccgattgtttcctatatgcagaaa
atgatctatgagagggtgcttgaaccaggttttatcaaacaagacagataa
DBGET
integrated database retrieval system
