Methanosarcina vacuolata: MSVAZ_0867
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Entry
MSVAZ_0867 CDS
T03815
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mvc
Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvc03016
]
MSVAZ_0867
Enzymes [BR:
mvc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSVAZ_0867
Transfer RNA biogenesis [BR:
mvc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSVAZ_0867
Prokaryotic type
MSVAZ_0867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKB43136
UniProt:
A0A0E3LGU6
LinkDB
All DBs
Position
complement(1080144..1081145)
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AA seq
333 aa
AA seq
DB search
MSPAGKLPSETERTLVRKSGAWTNPSYGSYPEKRPILEYIEKGVVNIDKPKGPTSHEVAA
WVKAILGVGTAGHAGSLDPKVTGLLPALLGKATKAVPALRLSGKEYVCLLKLHKEMPQKL
VRKVCEEFTGPIYQMPPIKSAVKRVVRVRTIYYLEVLEIEGSFVLFRVGCEAGTYIRKLC
HDIGLALGCGGHMQELRRTKAGPFTEETLVTLQDLKDAYVFWKEDRDESEIRRVIMPMET
AVSHLPKIILRDSAVDAVCSGATLAVPGITSLDANLKKGELTALFTLKGELVALAKAEMS
TEELLKASTGLAATPVRIMMETGTYPRGWNKKE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgctggcaaattgccgtccgaaactgaaagaactctggtccggaaatccggc
gcctggacaaacccctcttacggttcttaccctgaaaagcgccctattctcgaatatatc
gagaaaggggttgtaaatattgataaaccaaaggggccgacaagccacgaggttgcagcc
tgggtaaaagctattctgggcgtaggtacggcagggcatgcaggctcacttgatcccaag
gttacagggcttttgcccgccttacttggaaaggctacaaaggcggtccctgctctgcgt
ctttctggaaaggaatacgtctgtctcttgaagcttcataaggaaatgcctcaaaaacta
gtcaggaaggtctgtgaggaatttactggccctatctaccagatgcctcctatcaaatca
gctgtcaaacgcgttgtcagggtaaggacgatctattaccttgaagtgcttgaaattgaa
gggagttttgtgctctttcgtgtaggatgcgaagccggtacttacatcaggaaactttgc
catgatattgggcttgctcttggttgcggcggacatatgcaggaactcagaaggacaaaa
gcaggcccgtttaccgaggaaacacttgtcactctccaggatctcaaagatgcatatgta
ttctggaaggaagacagggatgagtccgaaatccggcgtgtaatcatgccaatggaaacg
gctgtatctcaccttcccaaaattatcctgcgggacagtgcagtagatgcagtctgttca
ggagctactctggcagttccgggcataacaagcctagatgcaaaccttaagaaaggagag
cttacagcgttgtttactcttaaaggtgagcttgttgcccttgcaaaggctgaaatgagt
acagaagagctcctcaaagcttcgaccggacttgcagctaccccggtccggattatgatg
gagacgggaacttatccaagaggttggaataaaaaggagtag
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