KEGG   Methanosarcina vacuolata: MSVAZ_0987
Entry
MSVAZ_0987        CDS       T03815                                 
Name
(GenBank) Archaeal transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mvc  Methanosarcina vacuolata
Pathway
mvc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mvc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSVAZ_0987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mvc03021]
    MSVAZ_0987
Transcription machinery [BR:mvc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MSVAZ_0987
 Prokaryotic type
  Archaeal type
    TFE
     MSVAZ_0987
SSDB
Motif
Pfam: TFIIE_alpha HVO_2753_ZBP RepL Zn_Ribbon_TF
Other DBs
NCBI-ProteinID: AKB43256
UniProt: A0A0E3LGX0
LinkDB
Position
complement(1216414..1216908)
AA seq 164 aa
MVDINDKVIRGYLLSLVGEEGLQMIEKMPEGEVTDEEIAAKTEVLLNTVRRTLFILNENK
FAICRRERDSNSGWLTYLWRLDFSDIEHQLMKEKKKLLRNLKTRLDFEENNVFYMCPQGC
VRLLFDEATETEFLCPMCGEDLVFYDNSYFIDVLRKRVDALSSV
NT seq 495 nt   +upstreamnt  +downstreamnt
ttggttgatataaatgacaaggtaattagaggatacctcctgagccttgtaggggaagaa
gggctacaaatgattgaaaaaatgcctgaaggcgaggttacggatgaagaaattgcggca
aagaccgaggttctgttgaacaccgtgaggagaacgctcttcatattaaacgaaaacaaa
tttgcaatatgtcgtcgggagagagattcaaacagtggatggttaacatatctctggcgc
ctggatttttctgatatagagcaccagctcatgaaggaaaagaaaaaattgctccgcaac
ctgaagactcgccttgatttcgaagaaaacaatgttttctatatgtgccctcagggttgt
gttcgccttctttttgacgaagctacagaaacagagtttctctgccccatgtgtggagaa
gacctggtcttctacgataactcatattttattgatgtcctgagaaagcgtgtagatgct
ctcagttcagtgtaa

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