Methanosarcina vacuolata: MSVAZ_0987
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Entry
MSVAZ_0987 CDS
T03815
Name
(GenBank) Archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSVAZ_0987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvc03021
]
MSVAZ_0987
Transcription machinery [BR:
mvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MSVAZ_0987
Prokaryotic type
Archaeal type
TFE
MSVAZ_0987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HVO_2753_ZBP
RepL
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AKB43256
UniProt:
A0A0E3LGX0
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All DBs
Position
complement(1216414..1216908)
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AA seq
164 aa
AA seq
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MVDINDKVIRGYLLSLVGEEGLQMIEKMPEGEVTDEEIAAKTEVLLNTVRRTLFILNENK
FAICRRERDSNSGWLTYLWRLDFSDIEHQLMKEKKKLLRNLKTRLDFEENNVFYMCPQGC
VRLLFDEATETEFLCPMCGEDLVFYDNSYFIDVLRKRVDALSSV
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
ttggttgatataaatgacaaggtaattagaggatacctcctgagccttgtaggggaagaa
gggctacaaatgattgaaaaaatgcctgaaggcgaggttacggatgaagaaattgcggca
aagaccgaggttctgttgaacaccgtgaggagaacgctcttcatattaaacgaaaacaaa
tttgcaatatgtcgtcgggagagagattcaaacagtggatggttaacatatctctggcgc
ctggatttttctgatatagagcaccagctcatgaaggaaaagaaaaaattgctccgcaac
ctgaagactcgccttgatttcgaagaaaacaatgttttctatatgtgccctcagggttgt
gttcgccttctttttgacgaagctacagaaacagagtttctctgccccatgtgtggagaa
gacctggtcttctacgataactcatattttattgatgtcctgagaaagcgtgtagatgct
ctcagttcagtgtaa
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