Methanosarcina vacuolata: MSVAZ_1053
Help
Entry
MSVAZ_1053 CDS
T03815
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSVAZ_1053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvc03019
]
MSVAZ_1053
03009 Ribosome biogenesis [BR:
mvc03009
]
MSVAZ_1053
04131 Membrane trafficking [BR:
mvc04131
]
MSVAZ_1053
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvc04147
]
MSVAZ_1053
Messenger RNA biogenesis [BR:
mvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSVAZ_1053
Ribosome biogenesis [BR:
mvc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSVAZ_1053
Membrane trafficking [BR:
mvc04131
]
SNARE
SNARE associated proteins
Others
MSVAZ_1053
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSVAZ_1053
Exosome [BR:
mvc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSVAZ_1053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
CDC48_2
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
AAA_33
IstB_IS21
AAA_28
nSTAND3
RNA_helicase
AAA_7
Mg_chelatase
AAA_18
AAA_25
Sigma54_activat
Parvo_NS1
NPHP3_N
DUF815
AAA_17
AAA_24
DUF5906
ATPase
Zeta_toxin
TsaE
SLFN-g3_helicase
bpMoxR
NB-ARC
PhoH
Vps4_C
AAA_lid_PRS2_C
MlrA_helical
Motif
Other DBs
NCBI-ProteinID:
AKB43322
UniProt:
A0A0E3Q483
LinkDB
All DBs
Position
complement(1295330..1297657)
Genome browser
AA seq
775 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTTLLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWD
QGLVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLVLALPESMTQGGPELQFGEHANEII
KRHILKRPVFRGDIIPIINSMSQPMTESLTTSQVIPLVAVETEPSNTIVLVTEETLIELR
KKPVQGYEKATRGVTTYEDIGGLGAEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMVERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIERDEEPEELEKVETEADEAALERERKEKADKYLMSL
AERTQGFVGADLLALVQEAAMRCLRENLPDLDLEKEAIPPERLEKIVVTKKNFEDALMEA
EPSALREIYVEMPNVSWNDVGGLDEAKQSITEAVEWPIKNPEKFARMGIKAPRGILLYGP
PGTGKTLIAKAVAKESNANFISVKGPEIFSKWLGESEKAIRETFRKARQVAPCVIFFDEI
DSIASMPGMESTDSHTSERVLNQLLTEMDGLESLRDVVVIAATNRPNLLDPAILRPGRFD
RLVYIGSPDRKGRLKIFRIHTKGTPLYENVNLEALADETEGYVGADIESVSREAVMIALR
ENFDAEYVEMRHFKEALKKVKPTITENIAQFYEKIEAQFKGGQRLTETAGYVGYR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaagcatatcctatcgaccttggaagaggaatt
atccgacttgaccctacaactttgctgaagcttcagctctcgccaggcgacatcgtggaa
ataagaggtaagaaaaagaccacggcaaaggtatggagagctgacaggcaggactgggac
cagggactcgtaagaattgataacttcatccggcaaaatgcaggtgtttccataggagag
aaggtaactatcaaaaaggttgaagccccggaagcaaaaaaacttgttctggcacttccg
gaaagcatgacacaggggggacctgaacttcagttcggggaacatgcaaatgaaatcata
aaacggcatatcctcaaaaggccggtttttaggggagatataattcctataataaactcg
atgtctcagccaatgacagaatcccttactacaagccaggtaatccctctggttgctgtt
gagactgaaccttcaaacacaattgtccttgttacggaagaaacacttatcgaacttcgt
aaaaaaccggtacaggggtacgaaaaagcaacccggggcgtgactacttatgaagatata
ggaggcctaggggctgaaatcatgcgtgtccgggaaatgatagagatgcccatgaagcat
cctgaacttttcgcccaccttaatattgagcctccgaaaggagtcattctatatggtccg
cccggaaccggaaaaaccctgattgcgaaagccgtagccaatgaatctggagcaagtttc
cattatattgccggccctgaaattgtagggaaattctatggagaaagtgaagaaaggcta
aggaagatcttcgaggaagcaactcaggatgctccatcagtcatttttattgacgaaatt
gactccattgcaccaaaaagagagaatgtaacaggggaagttgaaaggcgtgtggtcgcc
cagctcctgactctgcttgacgggatggtagagagaggtcaggtcgtggttataggagct
acaaaccgtgtggatgcgattgacccggcacttaggaggccaggccgctttgacagagaa
atccatatcggtgtgcctgatactaaagacaggtatgaaatccttcaaatccataccagg
ggtatgcccatagaaagggatgaggaaccagaggagctcgaaaaagtcgaaaccgaagct
gatgaggctgccctggagagggaaaggaaagaaaaggcagataaatatctgatgtctctg
gctgaaagaacccaggggtttgtaggcgcagatctgctggctcttgtacaggaagctgcc
atgcggtgcctcagggaaaatctgcctgaccttgatcttgaaaaggaagcaattccgcct
gagagactggaaaaaatcgttgtaaccaagaaaaattttgaagatgccctgatggaggcc
gaaccctcggctcttagagaaatttatgtggaaatgcccaacgttagctggaatgatgtt
ggagggctcgatgaagcaaagcagtccattactgaggctgtggaatggcccatcaaaaat
ccggaaaagttcgctcgtatgggcataaaagctccaagaggaatcctgctttacggcccg
ccaggaaccggaaagaccctgatagcaaaggctgttgccaaagagtcaaatgcgaacttc
ataagcgtcaaagggcctgagattttctcaaagtggcttggagaatcggaaaaagctata
agggagaccttcaggaaagcccggcaggtcgctccctgtgtgattttctttgatgaaatc
gattcgattgcttctatgccaggaatggaatccacggacagccacacttcagagagggtg
cttaaccagctcctgaccgagatggacgggcttgagtcccttagagatgtggtagtgatt
gccgcaaccaaccgccctaaccttctggaccctgcaatcctgcgtccaggacgctttgac
aggctggtttacatcggttctcctgaccggaaaggcaggctcaagatattcagaatccat
acaaagggtacacccctttatgaaaatgtgaaccttgaagcccttgccgatgaaactgag
ggttacgtaggcgccgatattgaatcagttagcagggaagccgtaatgattgccctgaga
gagaacttcgatgcagaatatgtagaaatgagacacttcaaagaagctctgaagaaggta
aaacccacaattacggagaatattgctcagttctacgaaaagatcgaggcgcagttcaag
ggaggccagagactcacagaaacagctggctatgtcggttacaggtaa
DBGET
integrated database retrieval system
