Methanosarcina vacuolata: MSVAZ_1162
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Entry
MSVAZ_1162 CDS
T03815
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSVAZ_1162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvc03009
]
MSVAZ_1162
Ribosome biogenesis [BR:
mvc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSVAZ_1162
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GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AKB43431
UniProt:
A0A0E3LH05
LinkDB
All DBs
Position
complement(1434100..1434792)
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AA seq
230 aa
AA seq
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MVSLDEAVTARLKRGSKHFEVLVEPEGALAYKRGEDVSLEDILAVETIFEDANRGDRAAE
SDILNAFETTDPFQIAAVILKSGELQLTAEQRKRMLEEKKKKVIYTISRNAINPQTKAPH
PPARIEKAMEEAKVHIDPLKSVDQLVNITMKAIRPLIPIRFEEVNVAVKIPPEYAPKAYG
DISKIGNITKEEWQRDGSWIAVVRIPAGVQTDFYALINHLTKGEAQTKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggacgaggcagtgactgcgcggcttaaaagaggcagcaaacacttcgaa
gtcctggtcgagcccgaaggagctctggcctataagcgaggagaagacgtaagccttgaa
gacattctggcggttgaaactatcttcgaagacgcaaaccgaggggaccgagcagcagag
tccgatattctcaatgcttttgagacaacggatcccttccagattgctgccgtgatcctg
aaaagcggggagcttcagctcactgctgaacagagaaaacgcatgcttgaggaaaaaaag
aaaaaagttatttataccatttccaggaatgcaataaacccccagacaaaagcacctcat
cctcccgcacggatcgaaaaagcgatggaggaggcaaaggtgcatatagaccccttaaaa
agcgtggatcagctggtcaacatcacaatgaaagccattcgcccgcttatacctatacgc
tttgaagaggtcaatgttgctgtgaaaatccctcccgaatatgctcccaaagcatacgga
gatatttctaagataggaaacattacgaaagaagaatggcagcgtgacggctcctggatt
gcagtggtaagaattccggcaggagtccaaactgatttttacgctcttataaatcatctt
acgaagggagaggctcaaactaaacttttataa
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