Methanosarcina vacuolata: MSVAZ_1254
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Entry
MSVAZ_1254 CDS
T03815
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSVAZ_1254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvc03019
]
MSVAZ_1254
03009 Ribosome biogenesis [BR:
mvc03009
]
MSVAZ_1254
04131 Membrane trafficking [BR:
mvc04131
]
MSVAZ_1254
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvc04147
]
MSVAZ_1254
Messenger RNA biogenesis [BR:
mvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSVAZ_1254
Ribosome biogenesis [BR:
mvc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSVAZ_1254
Membrane trafficking [BR:
mvc04131
]
SNARE
SNARE associated proteins
Others
MSVAZ_1254
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSVAZ_1254
Exosome [BR:
mvc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSVAZ_1254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_14
AAA_22
TIP49
CDC48_2
AAA_33
NACHT
IstB_IS21
ABC_tran
AAA_28
AAA_24
Parvo_NS1
nSTAND3
Mg_chelatase
RNA_helicase
NPHP3_N
Sigma54_activat
AAA_7
AAA_18
ATPase_2
Vps4_C
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
TsaE
ATPase
Zeta_toxin
DUF815
SLFN-g3_helicase
ResIII
PhoH
AAA_3
ORC-CDC6-like
Sigma54_activ_2
bpMoxR
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AKB43523
UniProt:
A0A0E3Q541
LinkDB
All DBs
Position
complement(1563260..1565554)
Genome browser
AA seq
764 aa
AA seq
DB search
MADREKITAKLKVAEADQRDVGKGIVRIDDSFREKLDLKPFDVVEIRGGKSTSALVGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVDIRKADWKEARSVTLAPVAKGMQIYAPSETLKA
VFMNRTVSRGDFISTTSLRRSRERETFGKGIMFEDFFQDFFGPGMEQSFGLGEIKLQVVS
TSPSGIVKITDMTEVELLHEAAEITPEQNVPTVMYEDLGGVKEAITKIREMIELPLKHPE
LFDRLGIDAPKGVLLYGPPGTGKTMLAKAVANETDAYFISVNGPEIMSKYYGESEKGIRD
VFEEAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKERKNVIVIGSTN
RPEAIDMALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRILPKINLNEPEIPSEILDTLRVTREDFENALKDVQPSAIREIL
IEIPNVSWEDVGGLEGVKQLLKEAVEWPLKSPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESEANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGA
SVSEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILVPVPD
AGARKEIFKVHTAKMSLSEDVDIDKLVSMTDQYTGADIAAVCKKAGRDALREDLHAKEVK
QKHFLQAIAETGPSVTPDTMKYYQAVQSGLRKRQSKEIETPFYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacagagaaaagataactgcaaaactaaaagtcgcagaagctgatcaaagagat
gtcggaaaaggaattgtccggatagatgatagtttcagggaaaagctggacctcaagccc
tttgacgtcgtggaaataagaggaggaaaatcgacttcagccctggtgggacgtccatat
cccagcgattcgggcctggatattatccgcatggacggacttatccgcacaaatgcaaaa
accagcataggggagtatgtggatattcgcaaagccgactggaaagaagcaaggagtgta
accctcgcgcctgtggctaagggcatgcagatctatgccccaagtgaaactcttaaagcc
gtattcatgaaccgtacggtttccaggggagattttatttccaccacaagcttgaggcgg
tcccgggaaagagagactttcggtaaaggaatcatgttcgaggatttctttcaggacttt
tttggtccaggtatggagcagtcatttgggctgggagaaataaagttacaggtggtctcc
acttccccgtccgggatagtaaagattacagatatgacagaagttgagcttttacatgaa
gctgcagagataactccggaacagaatgtacctactgtcatgtatgaggaccttggtggg
gttaaagaggctattaccaaaataagggaaatgatagagctgcctttgaagcatcctgaa
ctttttgataggctaggaattgatgctccaaaaggagtactgctttacgggccgcctgga
acaggcaagacaatgctcgcaaaagcagttgcaaacgaaaccgatgcttactttatctca
gtcaatggtccggaaattatgtccaagtattatggggaatcagaaaaagggatcagagac
gtctttgaagaagcagagaaaaacgctcctgcaatcattttccttgatgaaatagactcc
atcgcacctaagagggctgaggtgactggagaagtcgaaaggagagttgtagctcaactc
ctctccctgatggacgggcttaaagagcgaaagaacgtgattgtgatagggtcaaccaac
cgccctgaagcaattgatatggcactccgccgtcctggtcgatttgacagagagattgaa
ttaagggttccggacaccgaaggaaggcttgagattttccagattcatacgagaggtatg
cctcttgccgaaaacgtaaatctcatggacttcgctcagataacatatgggtttgtggga
gctgacattgctgcgctttgccgggaagctgcaatgagttccttgaggcggattctcccg
aagattaacctcaatgaacctgaaattccaagcgaaatccttgacacacttcgggtcaca
agggaagattttgaaaatgcccttaaagatgtccagccgtctgctataagagaaatcctt
atcgaaattcctaacgtgagctgggaagatgttggcggcctggaaggagtaaaacaactt
ctgaaggaggccgtagagtggcccctcaaaagtccggaatcgtacagggatataggagtt
gaagctcccaaaggagtgcttttatatggtcctccgggtactggaaagactctccttgca
aaagccattgcccatgagtccgaagctaacttcattaccgcaaaaggaagcgatctgctt
tccaagtggtacggagagtccgaaaaaaggattgctgaggtttttacacgggcaaggcag
gtcgctccatctattatcttcctggacgaacttgactctcttgcacctgttcgcggggct
tccgtaagtgagccacaggttacagctagaatccttaatcagctcctttccgagatggat
gggcttgaagaactcagagctgtagtggtaataggtgcaactaaccgtcctgatattata
gatccggctcttctaaggcctggacgttttgatgagttaattttagttcccgttccggac
gcgggagctcgtaaggaaatatttaaggttcataccgcgaaaatgtcgctttcagaggat
gttgatattgacaaactcgtatccatgaccgaccagtatacaggtgctgatattgcagcc
gtatgtaaaaaggcaggaagagacgcacttcgcgaagaccttcacgctaaagaagtaaag
cagaaacatttccttcaagcgattgctgaaaccgggccttcggtcactcctgataccatg
aaatattaccaggctgtacagagtggtctgagaaaacggcagtcaaaagaaatagagact
ccattttatatctga
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