Methanosarcina vacuolata: MSVAZ_2084
Help
Entry
MSVAZ_2084 CDS
T03815
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSVAZ_2084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvc03400
]
MSVAZ_2084
DNA repair and recombination proteins [BR:
mvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSVAZ_2084
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSVAZ_2084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
P-loop_SecA
AAA_16
SWI2_SNF2
ACDC
Flavi_DEAD
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AKB44353
UniProt:
A0A0E3Q6K1
LinkDB
All DBs
Position
complement(2654768..2656780)
Genome browser
AA seq
670 aa
AA seq
DB search
MKSSDKTSQAVSNKISETLRDARYWDSPQFKLVSDFEPKGSQPQAIEKLVEGLTEGERYQ
TLLGVTGSGKTYTIANVINQVRKPTIVIAHNKTLAAQLYNEFREFFPENRVEYFVSYYDY
YQPESYLPARDQYIEKDAQINPKIEQMRLAATASLMSRQDVIVVASVSCIYGLGNPENFQ
KMGFELKVGDKVPRKEILQKLVEIQFERNDLELMPGRFRVKGDTIDIIPGYFDNIIRIEL
FGDEVDRISEVDKQTGQRTEEMDYFFVYPARHYVIPEEEQKSAIQSILEELEEHLPELGL
LESHRLKQRTIYDMEMIQETGSCKGIENYSRHFDHRQPGEQPFCLLDYFPEDFLMVIDES
HQTIPQLHGMYNGDRSRKKNLVDYGFRLPSAYDNRPLKFDEFEEYMKNVIFVSATPSDYE
HEHSAQIVEQIIRPTGLLDPEVEIRPLEGQVRDVMQEVRKIVERGDRALVTTLTKKLAEE
LTEYLARNEIKARYLHSDIKTMERTEIIRELRLGKFDVLVGINLLREGLDIPEVGFIGIL
DADKEGFLRNSKSLIQIIGRAARNASSKVVLYADNMTDSIKSAVTETERRRSMQIAYNKE
HGIVPETIRKPIREKVVDITDTKHIPKTDIPNMIIELDTEMREAADRLDFERAIQVRELI
KKLEKEIKVV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttctgataagacatcccaagctgtatctaataaaatatccgaaacactacga
gatgcccgatattgggacagcccgcagttcaagctggtttccgattttgagccgaagggt
tcccagccgcaggcaatcgaaaaacttgtggaagggctgacagaaggagagcgataccag
accctgctaggagtaacagggtcagggaagacctataccattgcaaacgttataaaccag
gtcaggaaaccgaccattgttattgctcacaataaaacccttgccgcccagctttataat
gagttcagggagttcttccctgagaaccgggtggagtattttgtttcctattacgactat
tatcagcctgagtcctatcttcctgccagggaccaatatattgaaaaggatgctcagatt
aacccgaagatcgagcaaatgcggcttgctgctactgcttccctgatgtcacgccaggat
gttattgtagttgcatcagtatcctgtatctacgggcttggcaatcctgagaatttccag
aaaatggggtttgaattaaaggttggagataaggttcccagaaaagaaatcctgcaaaag
ctcgttgaaatacagtttgagcgaaacgaccttgaacttatgccagggcgcttcagggta
aaaggagataccattgatattattcccggatactttgacaatattatccggattgagctc
ttcggagatgaggtcgaccggatttctgaagtggacaagcagaccggtcagcgaacggaa
gaaatggactatttctttgtttatcctgcaaggcactatgtaattcctgaggaagagcag
aaaagtgcaattcagtccatcctcgaagagcttgaagaacatcttcctgagcttggtctt
cttgagtcgcacaggttgaagcagcgcacgatttatgatatggaaatgattcaggaaacc
ggcagttgcaagggtattgaaaactactcaagacattttgaccacagacagccgggagaa
cagcctttctgcctgcttgactatttccctgaggatttcctgatggtcatcgatgagagt
caccagaccatccctcagcttcacgggatgtacaacggagaccgctcaaggaagaagaac
cttgttgactatgggttcaggcttccgagtgcctacgataacaggcctctgaagttcgat
gaatttgaggagtacatgaaaaacgtgatttttgtctcggcgactccttcagactatgaa
catgagcattcagctcagatcgtggagcagattatccgtcctacaggacttctcgaccct
gaagtggaaattcgtcctcttgaaggtcaggtaagggacgttatgcaggaagtacggaag
attgtggaaaggggagaccgtgctcttgtaactaccctgacaaagaagcttgcagaagaa
ctgactgagtaccttgccaggaatgaaatcaaagctcgttacctgcactcggacattaaa
acaatggaaagaactgagattatccgcgagctccgccttggcaaattcgatgtccttgtc
gggatcaacctgctcagggagggacttgatattccggaagtgggtttcattggcatcctg
gatgcagacaaagaaggcttccttagaaactcaaaaagccttatccagatcataggccgc
gcagcccggaacgccagctcgaaggttgtcctgtatgccgacaatatgacggattctatc
aaaagtgccgttacagagacagaacgccgccgctccatgcagattgcctataataaggaa
cacggcatcgtcccggaaactatcaggaaacccatcagggaaaaggtcgtggatatcact
gacaccaaacacatcccgaaaaccgatattcccaatatgattatcgaactggataccgaa
atgagggaagctgctgacaggctggacttcgaaagggcaattcaggtaagggaattgata
aagaagctggagaaagagataaaagtagtctga
DBGET
integrated database retrieval system
