KEGG   Methanosarcina vacuolata: MSVAZ_2243
Entry
MSVAZ_2243        CDS       T03815                                 
Name
(GenBank) CRISPR-associated protein, CT1133 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
mvc  Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:mvc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mvc02048]
    MSVAZ_2243
Prokaryotic defense system [BR:mvc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    MSVAZ_2243
SSDB
Motif
Pfam: Cas_Csd1 CC2D1A-B_DM14 DUF5301
Other DBs
NCBI-ProteinID: AKB44512
UniProt: A0A0E3Q6S6
LinkDB
Position
2866888..2868780
AA seq 630 aa
MIIQSLCRYYDILAKDENANIPKLGYSSAKVSFSLVISPDGILSHIIDLRSDDKKPKPKD
INVPIQKSRANGIFPYFVCENAKYVFGVEKVKKSEFEKKFSLNSKNSTDDYKILEENDKE
VTLVHQRSRECFEAFKTLHHSILDGLNDQEVRGFLSFLDGWNPEEFLENPKTREYKDDIL
AGGNCVFECNGNFLHEKSAVRNAWETYSQNETGSTFAQCLISGKVEPVAKIHQKIKGVVG
AQSAGASIVSFNNDAFCSYGKEQSFNSPISESAMFKYTTALNHLLSSPSNRIRIADTTVV
FWAETSKKSCEKSCEELVKFFFDPPEPEKKEEKNVEGSRVQDITTVKEIEEILNKVRIGK
KVNQEDIGADPETNFYILGLSPNNARLAVRFWYVASIGSLIEKVARHHLDMEVIRDDYGP
RYVSVYRLLNETVPQSSDKKTVSPLLGGLILRSILTDTGYPISLYSAILSRVKVDGSINF
VRAGFIKAYLLRLSRAGLSNLSQDLITMSLNEESSSVPYRLGRLFAALEKAQNDTNREMK
STINSKYFSSASSTPAVVFPVLLKLAQHHIAKSEWGFRSNQLIEQILEGVDEFPAYLNLE
DQGMFMLGYYHQRKAFFTKKEVPSNKEVPL
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgatcatccaatcactctgccgctattatgatattcttgctaaagacgagaacgcaaat
attccaaagctaggatatagcagcgctaaagtctcattttcccttgtcatttctcctgat
ggcattctttcgcatattatagatcttagaagtgatgacaagaagccaaaacccaaagat
attaatgtgcctatccagaagtcccgcgctaacggtatatttccatattttgtctgtgaa
aatgcaaagtatgtttttggtgtcgaaaaagtaaaaaaaagtgaatttgagaagaaattt
agtttgaattcaaagaacagtactgatgactataaaatacttgaggaaaatgataaagaa
gtcactcttgtccatcagcgttccagagagtgctttgaggctttcaaaacacttcaccat
agtatattggatggtcttaatgatcaagaagtccgcggattcctttcttttctggatgga
tggaatccagaagagttcctcgaaaatccaaagaccagagagtacaaagatgatattctt
gctggcggaaactgtgtttttgagtgtaacgggaattttttgcatgaaaaaagtgcggtt
agaaacgcctgggaaacttactctcagaatgaaactggcagcacgtttgcccagtgcctg
ataagtggaaaagtagagccggtagccaagatacatcaaaagataaaaggtgttgtcggg
gctcaatcggcaggagcttccattgtcagtttcaataacgatgctttctgttcttatgga
aaagaacagagttttaattctccaatcagcgaatccgcgatgtttaagtatacaactgcc
ctgaatcatcttctttcaagtcccagtaacaggataaggattgcggatactacagttgtt
ttctgggctgagacaagtaaaaaatcctgtgaaaaatcctgtgaagaacttgttaaattc
ttttttgaccctccagaaccagagaaaaaagaagaaaaaaatgtagagggctctcgagta
caggacataaccacagtcaaagaaatagaggaaattctcaataaggtcagaatcggcaag
aaagtaaatcaagaggacattggggcagatccagagacgaatttctatattcttggtttg
tctcccaataatgcacggcttgctgtacgtttctggtatgttgccagtattgggagtttg
attgaaaaagtggctcgtcaccatctggacatggaagttatcagagatgattatggtcca
agatatgtctcagtatatcgcctgttgaatgagacagtccctcagagttctgacaaaaaa
acagtttctccacttcttggtggtcttattttgcgctcgattcttaccgacacaggctat
cctatctcattatatagtgcaatcctgagccgtgttaaagtagatggctcaataaatttt
gtcagagctggttttatcaaagcatatctactcagattgagcagagctggattatcgaat
ttgagtcaggatttgattaccatgagtttaaacgaggaaagttctagtgtgccatatcgt
ttaggaaggttgtttgccgctcttgaaaaggcacagaatgatacgaacagagagatgaag
agcaccattaacagtaagtactttagcagcgcctcgtcaacacccgctgttgtatttcct
gtgctgttaaaacttgcacaacaccacattgccaaatcagaatggggtttcaggtctaat
cagttgattgaacaaattctggaaggcgtggatgagtttcctgcgtacctgaatcttgaa
gatcagggtatgttcatgcttggttactatcaccaacgtaaggcttttttcacgaaaaaa
gaggttccatcaaataaggaggtgccattatga

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