Methanosarcina vacuolata: MSVAZ_2377
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Entry
MSVAZ_2377 CDS
T03815
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mvc
Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvc03000
]
MSVAZ_2377
Transcription factors [BR:
mvc03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSVAZ_2377
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
DUF7436
Spore_SspJ
Regulator_TrmB
PLDc_2
DUF6879
AP3B1_C_2
Motif
Other DBs
NCBI-ProteinID:
AKB44646
UniProt:
A0A0E3LHP8
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Position
3051669..3052493
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AA seq
274 aa
AA seq
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MQNKRLLQDIGLSAYEAAAYLSLLKLGISEANLVYRDADVPYGKIYTVLESLAGKGFVEV
QASRPKKFRAVDPEIALNSFFEKRKSEFEKEIRALKGFVEEAKQALKAIPVQKRKDEVFW
TTAVTESDIRKFAVSTYGEIKKSVLVIPPFFGMPIIPSLLPEILKAIDRGVKIRLLAPPR
FAALSSVFSMQGEENFGKFKKGIEVRLVQRNFNSCFGIFDDSVVVLFQLHPQDNDRVLSV
VKIRDTGLAKNMSTEFELLWNEGEEFDFEDVAER
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaaaggcttcttcaggacatagggctgagtgcttatgaagcagctgcatat
ctgtctctcttgaaactcgggatctccgaagcaaatctcgtttacagggatgcagacgtg
ccctatgggaagatatataccgttctggaatcgctggcaggaaaaggttttgtagaagtc
caggcttcaagacctaaaaagttcagggcggttgatcctgaaattgccttaaactcattt
tttgaaaagcgaaaatccgagtttgaaaaagaaataagggccttaaagggttttgttgaa
gaagcaaaacaggccctgaaagctataccggttcagaaacgaaaagatgaggtcttctgg
acgactgccgtaaccgagtccgacatcagaaagtttgccgtttctacttatggagagata
aaaaagtcagtacttgtaattcctcctttctttggaatgcccatcattcctagcttgctg
cctgaaatcttaaaagctattgaccgtggggttaaaataaggctgctggcacctcctcgc
tttgcagctctttcttcagtgttttcaatgcagggagaagagaattttggaaaatttaaa
aaaggcatagaagtgaggcttgtccagaggaactttaactcctgctttggcatctttgac
gacagtgttgtggtgctgtttcaactccatccacaggataatgaccgcgtcctttcggtt
gtaaaaatccgggatacagggcttgcaaaaaatatgagtacggaatttgaactcctctgg
aatgagggagaagagtttgattttgaagacgtagctgaaagataa
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