Methanosarcina vacuolata: MSVAZ_3011
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Entry
MSVAZ_3011 CDS
T03815
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSVAZ_3011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvc03019
]
MSVAZ_3011
03009 Ribosome biogenesis [BR:
mvc03009
]
MSVAZ_3011
04131 Membrane trafficking [BR:
mvc04131
]
MSVAZ_3011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvc04147
]
MSVAZ_3011
Messenger RNA biogenesis [BR:
mvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSVAZ_3011
Ribosome biogenesis [BR:
mvc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSVAZ_3011
Membrane trafficking [BR:
mvc04131
]
SNARE
SNARE associated proteins
Others
MSVAZ_3011
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSVAZ_3011
Exosome [BR:
mvc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSVAZ_3011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_22
TIP49
CDC48_2
AAA_33
AAA_14
nSTAND3
IstB_IS21
NACHT
Sigma54_activat
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_28
ABC_tran
Parvo_NS1
AAA_24
AAA_7
AAA_18
Vps4_C
TsaE
Zeta_toxin
NB-ARC
ATPase
AAA_11
AAA_17
AAA_25
AAA_3
PhoH
bpMoxR
ORC-CDC6-like
Sigma54_activ_2
SLFN-g3_helicase
ResIII
KAP_NTPase
DUF815
Clathrin
Motif
Other DBs
NCBI-ProteinID:
AKB45280
UniProt:
A0A0E3Q8N5
LinkDB
All DBs
Position
3889361..3891655
Genome browser
AA seq
764 aa
AA seq
DB search
MTNGDEKTIKLKVAEANHRDVGKGIVRIDEAFREKLGLNPFDVVEIRGGKVTSALIGRPY
PDDEGLDIIRMDGLIRTNAKTSIGEYVEICKAEWKEAKHVTLSPVKRGIKIYAPSETLSA
VFMNRTVSKGDFISTTSLSSSRDMDTYGKGLMLDEFFQDFFRQGFGSSFGLGEIKLQVVS
TSPSGIVKITDMTEIELLPEAREITPEQAIPTVMYEDLGGLQDAILKVREMVEIPLKYPE
LFDRLGIEAPKGVLLHGPPGTGKTMLARAVASESDAYFISINGPEIMSKYYGESEKAIRD
IFDEAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKSRKNVIVIGATN
RPEALDLALRRPGRFDREIELRVPSTEGRLEIFHIHTRGMPLTEDVNLMDLAQITYGFVG
SDIAALCREAAMRALRRVFPRIDLKEPHIPKEILDSLQVTRADFEEAMKDVQPSAIREIL
IEIPNISWNDVGGLEDVKCLLKEAVEWPLKNPESYRHIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIVFLDELDSLAPIRGI
SAGEPQVTARILNQLLSEMDGLEELMGVVVIGATNRPDIIDPALIRPGRFDELILVPVPD
KGARREILKVHTKKMALAEDVDIEELVARTDNYTGADLAAICKKAGRYALREELHADNVK
QKHFLKAVSETRPSVTPDTMKYYEAIKGEIITRKSKEIENPLYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgactaatggagatgaaaagacaatcaaactgaaagttgcagaagctaaccatcgtgac
gtcggaaaaggtatagttcgtatcgatgaagccttcagggaaaagcttggtttaaacccc
tttgacgtagtggagatcagagggggaaaggtgacctcagctcttatagggagaccttat
cctgacgatgagggtcttgacattatccgtatggacgggctcatccgcacgaatgcgaag
accagcataggagaatacgtggaaatctgcaaagcagaatggaaagaagcaaaacatgtg
accctctctcccgtaaaaaggggaataaagatttatgctcccagtgagactcttagtgct
gttttcatgaaccgtacggtttcaaaaggggattttatctccaccaccagtttaagtagc
tcccgagatatggatacttatggcaaaggactcatgctggatgaatttttccaggacttt
ttcaggcagggcttcggctcctctttcgggctcggggaaatcaagcttcaggttgtttct
acctctccgtcggggatagtaaagatcactgacatgaccgaaattgaactcctgccagaa
gccagggaaattactcctgagcaggccattccaactgttatgtatgaagatctgggtgga
ctccaggatgcaattttaaaggtcagggaaatggtagaaatccctctgaaataccctgaa
ctttttgatcggttagggattgaagccccaaaaggagtgttgctccatggccctcccggt
actggcaagactatgcttgcaagggctgttgcaagtgagtctgatgcttattttatctct
atcaacggcccggaaataatgtccaaatattacggagagtccgaaaaagctatccgcgat
atattcgatgaggctgaaaagaatgcaccagcaatcatctttctggacgagatcgattcc
attgccccgaaaagagctgaggtaacaggagaagttgagaggagagtggtcgcacagctc
ctttccctgatggatgggctgaaaagccgcaagaatgtaatcgtgataggtgcaacgaac
cgccctgaagctctggatctggcactgcgccgtccgggcaggtttgacagggaaattgag
ctcagggtcccgagtaccgaaggcaggctcgaaattttccatattcatacgagaggaatg
ccccttacagaggacgtaaacctcatggatcttgctcaaattacctatgggtttgtgggg
tctgatattgcagcactctgccgggaagctgccatgagagctcttaggcgtgtcttcccg
aggattgatctaaaagaacctcatatcccaaaagaaatcctggattcattacaggtcaca
agagcagacttcgaagaggccatgaaagacgtgcagccctcagccatccgggaaatactt
attgagattcccaatatcagttggaatgatgttggcggcctggaagacgtaaaatgtctc
ctgaaagaagctgtagaatggccacttaaaaaccctgagtcttatcggcatataggtgtg
gaagctccaaaaggcgtactcctatatggtcctccgggcactggaaagacccttctggca
aaagccattgcccatgagtcagatgccaattttatcactgccaaaggaagcgacctcctt
tccaagtggtatggagaatccgaaaagaggattgctgaggtcttcaccagggcgagacag
gttgccccttcaattgtttttctggacgaacttgattcacttgctcccatccgtgggatc
tcagcaggtgagcctcaggttacagccagaatccttaatcagcttctttctgaaatggat
ggtcttgaagaactcatgggagttgtagtgatcggtgcaactaaccgccctgatatcata
gacccagctttgattcgtccagggcgttttgatgagcttattctcgtcccggtccctgat
aaaggagctagaagggaaattctcaaggttcacacaaagaagatggcccttgcagaagat
gtggatatcgaggaactcgttgcacgtaccgataattacacaggcgcagatcttgcagca
atatgtaaaaaggcaggaagatacgccctgcgtgaagaacttcatgcagacaatgttaaa
cagaaacatttccttaaagcagtttcagagacacgaccttcagttacccctgatactatg
aaatactatgaagcaataaaaggagaaatcataaccaggaaatcaaaggaaatagaaaat
cccttatatatatga
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