Entry |
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Name |
(GenBank) Exonuclease SbcC
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
mvc Methanosarcina vacuolata
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Brite |
KEGG Orthology (KO) [BR:mvc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mvc03400]
MSVAZ_3035
DNA repair and recombination proteins [BR:mvc03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSVAZ_3035
Archaeal homologous recombinant proteins
MSVAZ_3035
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(3923152..3926376)
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AA seq |
1074 aa
MKLKNLHIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKTLSKDFVLA
DVIFKGAENAKINLGFEHLGQDYLIEQAFRYSSKSENASNSKCVLYADGESIVDQATRTY
EEVCSLLNMDEDAYRNCAYIRQGEIDVLINAKPKDRQRMIDGLLQLGKLEEYRERAGSAK
TAVKRLQRDTGNSLSSVKSEIEGIESTEPHAVLNGLRQKIKENDAILKKYNENKETAAAQ
KEKLDLMITEHRERLQEIQALKQALVKSQEDKAGCIREKETFAVESREQRQALLRLEEEN
NLIREKCGFGDLEIEALSLQQEKEEFLAREKVNAVSKELALLLREEEVHTQALHDLENEK
AETEQTLIHCREDIGSTNREIEGNRKNILRIEDENKKLKETAKETTGFTDTYEIPLFINE
LEEKESLLRERKNEASTKLALAFKEKETGDINLLTLDKELQNARVAVRKSKTEIEILEEE
LRENEKAVLEVQEQKSEASAGLKGLGFTGEQLEDLEYLSELLLENKNRLHGREKELEATV
RELDKVIRKNRQLLAEGKCPTCGQDLKGSEIACTTGESEQKREKLAAELLDIKLQQAEVE
KKLNRLKDAKKLEKRISDYDMETERLKNKAKDLQERIEIHKTRTEEDSLKLEGLNKQKEE
LETKMGKLLPDIKALQGWEAAAQKAHGESERVLREAKAFEKKLAENTSERESLNGKIRTS
LALIENYGQRLEELNEKLKVLAERETQEKEKLKTLGVELETLRKKEAAVKETYEESAKRL
LKTKKLGANLIQMDNVKHKISELEASIRNLAEKVGFFDREILERNERVKQLEGKLQGSRF
EDLQSQRAQLEEYQANLTEKIRQITAAKDALLKEVGMVENSLKRRNELKEELKALENRQQ
YLEAVYSNAEELESMYMRVRADMRTKNIGALSTLLNEMFSFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLAMGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDMMRGIGVGQIIVVSHDESLIDSADHVFQVEKDPITNMSSIAKL |
NT seq |
3225 nt +upstreamnt +downstreamnt
gtgaaactcaaaaacctgcatattgaaaacatccggagttataaaaaactggattttaca
tttgaagatggagttacagtcatttccggggtgaacgggagcgggaagtccagcctgctt
gaagcatgttttatggggctttttgggagcaaaactctttcaaaggactttgtgcttgca
gatgtaatcttcaaaggggctgaaaatgcgaaaataaacctgggttttgagcatttaggg
caggactaccttatagaacaggctttcaggtattcttctaaaagtgagaacgcttcgaat
tcgaaatgcgtgctctatgccgacggggagagtattgttgatcaggctacacggacttac
gaagaggtctgttctcttctgaatatggacgaagatgcgtacaggaactgtgcttatatc
aggcagggcgaaattgatgtactcattaatgcaaaaccaaaagataggcagcgaatgatc
gacggccttctgcagctcggaaagctcgaagaatacagggaaagggcaggaagcgcaaaa
acggctgtaaaaaggcttcaaagggacacaggtaacagcctttcgagcgtaaaatctgaa
attgagggaattgaaagtacagaaccgcatgccgttttgaatgggctcaggcagaagata
aaggaaaacgatgctatcttaaaaaaatataatgaaaataaagagacggcagccgcccag
aaagaaaaactcgaccttatgatcacagagcacagggaacgtctccaggaaatccaggct
ctgaagcaggccctggttaaatctcaggaagacaaggctggctgtatccgggaaaaagaa
accttcgccgtagaatcccgtgaacaaaggcaagctctgctcagactggaagaagaaaat
aatcttattcgagaaaaatgtggttttggagatcttgagattgaggctctgagcctgcag
caggaaaaagaggaatttcttgccagagaaaaggtaaacgcagtctcaaaagaacttgct
cttctcctcagggaagaagaggttcacactcaggctctgcacgaccttgaaaacgaaaag
gctgagaccgaacagactttgatccattgcagggaggatatcgggtctacaaaccgggaa
attgaaggaaataggaaaaatatactgagaatcgaggatgaaaataaaaagctaaaagaa
actgcaaaagagactacaggcttcacggacacttatgagattcctttatttataaatgag
ctcgaagaaaaagaaagccttctgcgcgaacgaaaaaacgaagcctcgacaaaacttgcg
cttgctttcaaagaaaaagaaaccggagacataaatcttctcacactcgataaggaactt
caaaatgccagggtcgcagttcggaaaagtaaaacagagattgaaattcttgaagaggag
ctcagggaaaatgaaaaggcagttctggaagtccaggagcaaaaatccgaagcttctgca
gggttaaagggtcttggctttaccggagaacagctagaggacctggagtacctcagtgaa
cttctgctggaaaacaaaaacagactgcatgggcgagaaaaagagcttgaagctaccgtc
agggagcttgataaagttatccgtaaaaaccggcagctgcttgccgaaggaaaatgccct
acatgcgggcaggatcttaaaggctctgaaatcgcatgcacaaccggggaatccgaacag
aagagagaaaagcttgcagcagaacttctcgatataaagctccagcaggccgaagtcgag
aaaaaactcaatcggcttaaggatgcaaaaaagctggagaagcggatttcggattacgac
atggaaaccgaaagactcaaaaataaggcaaaagacctgcaagaaaggatagagatccac
aaaacccgaaccgaggaagattcccttaaacttgaaggccttaataaacaaaaggaagaa
cttgagaccaagatgggtaagcttcttcctgacattaaagccctgcagggatgggaggca
gcagctcaaaaagcccatggtgagagtgaaagagtacttcgagaggcaaaagcctttgag
aaaaagcttgccgaaaacacctctgaaagagaaagcctgaacgggaaaatcaggacttcc
ctggcactgatcgaaaattacgggcagaggcttgaagagctcaatgagaaactaaaagtg
cttgccgagcgggagactcaggaaaaggaaaaactcaaaaccctgggagttgagcttgaa
accctgcggaaaaaagaagccgcggtaaaagaaacctatgaagagagtgcaaagcgtctc
ttgaagacaaaaaaactcggggcaaacctgatccagatggataacgttaagcacaaaatc
tccgagcttgaggcttcaatcaggaaccttgccgaaaaagtcggcttctttgacagggaa
atccttgaaagaaacgaacgggtaaaacagcttgaaggaaagctgcaggggagcaggttc
gaagatcttcagtcacagcgtgcccagcttgaagagtatcaggcaaaccttactgaaaaa
atccggcaaataacggctgccaaagatgcgctcttaaaagaagtcggtatggtcgagaat
agtctaaaacgtcgcaatgagctgaaagaagaactcaaagctcttgagaacaggcagcag
tacctcgaagccgtatatagcaacgccgaggagcttgagagcatgtatatgcgcgttcgg
gctgatatgcggacaaaaaacataggagctctttctacccttttgaatgaaatgttcagc
tttatgtatacaaataatgcctattcccatatcgaacttgacccggaatataacctgacg
gtttacagaaaagacggcaccccccttgaaccaaaactccttagcgggggagaacgtgca
atctttaacctcgtcctgcgctgtgcgatctacaggcttcttgccatgggttttggcgga
gatagagcagacgggctcccccctatgatccttgatgagcctacggttttcctggaccgc
gggcatataaaccagcttttgaaactcatagacatgatgcgcggcataggtgtaggccag
attattgtggtatcccatgatgaatccctaatagattcggcagaccacgtcttccaggta
gaaaaagaccctattaccaatatgtcgtctattgcaaagctttaa |