KEGG   Methanosarcina vacuolata: MSVAZ_3035
Entry
MSVAZ_3035        CDS       T03815                                 
Name
(GenBank) Exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mvc  Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:mvc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvc03400]
    MSVAZ_3035
DNA repair and recombination proteins [BR:mvc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MSVAZ_3035
    Archaeal homologous recombinant proteins
     MSVAZ_3035
SSDB
Motif
Pfam: SMC_N AAA_15 AAA_21 AAA_29 SbcC_Walker_B ABC_tran AAA_16
Other DBs
NCBI-ProteinID: AKB45304
UniProt: A0A0E3Q954
LinkDB
Position
complement(3923152..3926376)
AA seq 1074 aa
MKLKNLHIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKTLSKDFVLA
DVIFKGAENAKINLGFEHLGQDYLIEQAFRYSSKSENASNSKCVLYADGESIVDQATRTY
EEVCSLLNMDEDAYRNCAYIRQGEIDVLINAKPKDRQRMIDGLLQLGKLEEYRERAGSAK
TAVKRLQRDTGNSLSSVKSEIEGIESTEPHAVLNGLRQKIKENDAILKKYNENKETAAAQ
KEKLDLMITEHRERLQEIQALKQALVKSQEDKAGCIREKETFAVESREQRQALLRLEEEN
NLIREKCGFGDLEIEALSLQQEKEEFLAREKVNAVSKELALLLREEEVHTQALHDLENEK
AETEQTLIHCREDIGSTNREIEGNRKNILRIEDENKKLKETAKETTGFTDTYEIPLFINE
LEEKESLLRERKNEASTKLALAFKEKETGDINLLTLDKELQNARVAVRKSKTEIEILEEE
LRENEKAVLEVQEQKSEASAGLKGLGFTGEQLEDLEYLSELLLENKNRLHGREKELEATV
RELDKVIRKNRQLLAEGKCPTCGQDLKGSEIACTTGESEQKREKLAAELLDIKLQQAEVE
KKLNRLKDAKKLEKRISDYDMETERLKNKAKDLQERIEIHKTRTEEDSLKLEGLNKQKEE
LETKMGKLLPDIKALQGWEAAAQKAHGESERVLREAKAFEKKLAENTSERESLNGKIRTS
LALIENYGQRLEELNEKLKVLAERETQEKEKLKTLGVELETLRKKEAAVKETYEESAKRL
LKTKKLGANLIQMDNVKHKISELEASIRNLAEKVGFFDREILERNERVKQLEGKLQGSRF
EDLQSQRAQLEEYQANLTEKIRQITAAKDALLKEVGMVENSLKRRNELKEELKALENRQQ
YLEAVYSNAEELESMYMRVRADMRTKNIGALSTLLNEMFSFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLAMGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDMMRGIGVGQIIVVSHDESLIDSADHVFQVEKDPITNMSSIAKL
NT seq 3225 nt   +upstreamnt  +downstreamnt
gtgaaactcaaaaacctgcatattgaaaacatccggagttataaaaaactggattttaca
tttgaagatggagttacagtcatttccggggtgaacgggagcgggaagtccagcctgctt
gaagcatgttttatggggctttttgggagcaaaactctttcaaaggactttgtgcttgca
gatgtaatcttcaaaggggctgaaaatgcgaaaataaacctgggttttgagcatttaggg
caggactaccttatagaacaggctttcaggtattcttctaaaagtgagaacgcttcgaat
tcgaaatgcgtgctctatgccgacggggagagtattgttgatcaggctacacggacttac
gaagaggtctgttctcttctgaatatggacgaagatgcgtacaggaactgtgcttatatc
aggcagggcgaaattgatgtactcattaatgcaaaaccaaaagataggcagcgaatgatc
gacggccttctgcagctcggaaagctcgaagaatacagggaaagggcaggaagcgcaaaa
acggctgtaaaaaggcttcaaagggacacaggtaacagcctttcgagcgtaaaatctgaa
attgagggaattgaaagtacagaaccgcatgccgttttgaatgggctcaggcagaagata
aaggaaaacgatgctatcttaaaaaaatataatgaaaataaagagacggcagccgcccag
aaagaaaaactcgaccttatgatcacagagcacagggaacgtctccaggaaatccaggct
ctgaagcaggccctggttaaatctcaggaagacaaggctggctgtatccgggaaaaagaa
accttcgccgtagaatcccgtgaacaaaggcaagctctgctcagactggaagaagaaaat
aatcttattcgagaaaaatgtggttttggagatcttgagattgaggctctgagcctgcag
caggaaaaagaggaatttcttgccagagaaaaggtaaacgcagtctcaaaagaacttgct
cttctcctcagggaagaagaggttcacactcaggctctgcacgaccttgaaaacgaaaag
gctgagaccgaacagactttgatccattgcagggaggatatcgggtctacaaaccgggaa
attgaaggaaataggaaaaatatactgagaatcgaggatgaaaataaaaagctaaaagaa
actgcaaaagagactacaggcttcacggacacttatgagattcctttatttataaatgag
ctcgaagaaaaagaaagccttctgcgcgaacgaaaaaacgaagcctcgacaaaacttgcg
cttgctttcaaagaaaaagaaaccggagacataaatcttctcacactcgataaggaactt
caaaatgccagggtcgcagttcggaaaagtaaaacagagattgaaattcttgaagaggag
ctcagggaaaatgaaaaggcagttctggaagtccaggagcaaaaatccgaagcttctgca
gggttaaagggtcttggctttaccggagaacagctagaggacctggagtacctcagtgaa
cttctgctggaaaacaaaaacagactgcatgggcgagaaaaagagcttgaagctaccgtc
agggagcttgataaagttatccgtaaaaaccggcagctgcttgccgaaggaaaatgccct
acatgcgggcaggatcttaaaggctctgaaatcgcatgcacaaccggggaatccgaacag
aagagagaaaagcttgcagcagaacttctcgatataaagctccagcaggccgaagtcgag
aaaaaactcaatcggcttaaggatgcaaaaaagctggagaagcggatttcggattacgac
atggaaaccgaaagactcaaaaataaggcaaaagacctgcaagaaaggatagagatccac
aaaacccgaaccgaggaagattcccttaaacttgaaggccttaataaacaaaaggaagaa
cttgagaccaagatgggtaagcttcttcctgacattaaagccctgcagggatgggaggca
gcagctcaaaaagcccatggtgagagtgaaagagtacttcgagaggcaaaagcctttgag
aaaaagcttgccgaaaacacctctgaaagagaaagcctgaacgggaaaatcaggacttcc
ctggcactgatcgaaaattacgggcagaggcttgaagagctcaatgagaaactaaaagtg
cttgccgagcgggagactcaggaaaaggaaaaactcaaaaccctgggagttgagcttgaa
accctgcggaaaaaagaagccgcggtaaaagaaacctatgaagagagtgcaaagcgtctc
ttgaagacaaaaaaactcggggcaaacctgatccagatggataacgttaagcacaaaatc
tccgagcttgaggcttcaatcaggaaccttgccgaaaaagtcggcttctttgacagggaa
atccttgaaagaaacgaacgggtaaaacagcttgaaggaaagctgcaggggagcaggttc
gaagatcttcagtcacagcgtgcccagcttgaagagtatcaggcaaaccttactgaaaaa
atccggcaaataacggctgccaaagatgcgctcttaaaagaagtcggtatggtcgagaat
agtctaaaacgtcgcaatgagctgaaagaagaactcaaagctcttgagaacaggcagcag
tacctcgaagccgtatatagcaacgccgaggagcttgagagcatgtatatgcgcgttcgg
gctgatatgcggacaaaaaacataggagctctttctacccttttgaatgaaatgttcagc
tttatgtatacaaataatgcctattcccatatcgaacttgacccggaatataacctgacg
gtttacagaaaagacggcaccccccttgaaccaaaactccttagcgggggagaacgtgca
atctttaacctcgtcctgcgctgtgcgatctacaggcttcttgccatgggttttggcgga
gatagagcagacgggctcccccctatgatccttgatgagcctacggttttcctggaccgc
gggcatataaaccagcttttgaaactcatagacatgatgcgcggcataggtgtaggccag
attattgtggtatcccatgatgaatccctaatagattcggcagaccacgtcttccaggta
gaaaaagaccctattaccaatatgtcgtctattgcaaagctttaa

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