Methanosarcina vacuolata: MSVAZ_3035
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Entry
MSVAZ_3035 CDS
T03815
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mvc
Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvc03400
]
MSVAZ_3035
DNA repair and recombination proteins [BR:
mvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSVAZ_3035
Archaeal homologous recombinant proteins
MSVAZ_3035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKB45304
UniProt:
A0A0E3Q954
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All DBs
Position
complement(3923152..3926376)
Genome browser
AA seq
1074 aa
AA seq
DB search
MKLKNLHIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKTLSKDFVLA
DVIFKGAENAKINLGFEHLGQDYLIEQAFRYSSKSENASNSKCVLYADGESIVDQATRTY
EEVCSLLNMDEDAYRNCAYIRQGEIDVLINAKPKDRQRMIDGLLQLGKLEEYRERAGSAK
TAVKRLQRDTGNSLSSVKSEIEGIESTEPHAVLNGLRQKIKENDAILKKYNENKETAAAQ
KEKLDLMITEHRERLQEIQALKQALVKSQEDKAGCIREKETFAVESREQRQALLRLEEEN
NLIREKCGFGDLEIEALSLQQEKEEFLAREKVNAVSKELALLLREEEVHTQALHDLENEK
AETEQTLIHCREDIGSTNREIEGNRKNILRIEDENKKLKETAKETTGFTDTYEIPLFINE
LEEKESLLRERKNEASTKLALAFKEKETGDINLLTLDKELQNARVAVRKSKTEIEILEEE
LRENEKAVLEVQEQKSEASAGLKGLGFTGEQLEDLEYLSELLLENKNRLHGREKELEATV
RELDKVIRKNRQLLAEGKCPTCGQDLKGSEIACTTGESEQKREKLAAELLDIKLQQAEVE
KKLNRLKDAKKLEKRISDYDMETERLKNKAKDLQERIEIHKTRTEEDSLKLEGLNKQKEE
LETKMGKLLPDIKALQGWEAAAQKAHGESERVLREAKAFEKKLAENTSERESLNGKIRTS
LALIENYGQRLEELNEKLKVLAERETQEKEKLKTLGVELETLRKKEAAVKETYEESAKRL
LKTKKLGANLIQMDNVKHKISELEASIRNLAEKVGFFDREILERNERVKQLEGKLQGSRF
EDLQSQRAQLEEYQANLTEKIRQITAAKDALLKEVGMVENSLKRRNELKEELKALENRQQ
YLEAVYSNAEELESMYMRVRADMRTKNIGALSTLLNEMFSFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLAMGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDMMRGIGVGQIIVVSHDESLIDSADHVFQVEKDPITNMSSIAKL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcaaaaacctgcatattgaaaacatccggagttataaaaaactggattttaca
tttgaagatggagttacagtcatttccggggtgaacgggagcgggaagtccagcctgctt
gaagcatgttttatggggctttttgggagcaaaactctttcaaaggactttgtgcttgca
gatgtaatcttcaaaggggctgaaaatgcgaaaataaacctgggttttgagcatttaggg
caggactaccttatagaacaggctttcaggtattcttctaaaagtgagaacgcttcgaat
tcgaaatgcgtgctctatgccgacggggagagtattgttgatcaggctacacggacttac
gaagaggtctgttctcttctgaatatggacgaagatgcgtacaggaactgtgcttatatc
aggcagggcgaaattgatgtactcattaatgcaaaaccaaaagataggcagcgaatgatc
gacggccttctgcagctcggaaagctcgaagaatacagggaaagggcaggaagcgcaaaa
acggctgtaaaaaggcttcaaagggacacaggtaacagcctttcgagcgtaaaatctgaa
attgagggaattgaaagtacagaaccgcatgccgttttgaatgggctcaggcagaagata
aaggaaaacgatgctatcttaaaaaaatataatgaaaataaagagacggcagccgcccag
aaagaaaaactcgaccttatgatcacagagcacagggaacgtctccaggaaatccaggct
ctgaagcaggccctggttaaatctcaggaagacaaggctggctgtatccgggaaaaagaa
accttcgccgtagaatcccgtgaacaaaggcaagctctgctcagactggaagaagaaaat
aatcttattcgagaaaaatgtggttttggagatcttgagattgaggctctgagcctgcag
caggaaaaagaggaatttcttgccagagaaaaggtaaacgcagtctcaaaagaacttgct
cttctcctcagggaagaagaggttcacactcaggctctgcacgaccttgaaaacgaaaag
gctgagaccgaacagactttgatccattgcagggaggatatcgggtctacaaaccgggaa
attgaaggaaataggaaaaatatactgagaatcgaggatgaaaataaaaagctaaaagaa
actgcaaaagagactacaggcttcacggacacttatgagattcctttatttataaatgag
ctcgaagaaaaagaaagccttctgcgcgaacgaaaaaacgaagcctcgacaaaacttgcg
cttgctttcaaagaaaaagaaaccggagacataaatcttctcacactcgataaggaactt
caaaatgccagggtcgcagttcggaaaagtaaaacagagattgaaattcttgaagaggag
ctcagggaaaatgaaaaggcagttctggaagtccaggagcaaaaatccgaagcttctgca
gggttaaagggtcttggctttaccggagaacagctagaggacctggagtacctcagtgaa
cttctgctggaaaacaaaaacagactgcatgggcgagaaaaagagcttgaagctaccgtc
agggagcttgataaagttatccgtaaaaaccggcagctgcttgccgaaggaaaatgccct
acatgcgggcaggatcttaaaggctctgaaatcgcatgcacaaccggggaatccgaacag
aagagagaaaagcttgcagcagaacttctcgatataaagctccagcaggccgaagtcgag
aaaaaactcaatcggcttaaggatgcaaaaaagctggagaagcggatttcggattacgac
atggaaaccgaaagactcaaaaataaggcaaaagacctgcaagaaaggatagagatccac
aaaacccgaaccgaggaagattcccttaaacttgaaggccttaataaacaaaaggaagaa
cttgagaccaagatgggtaagcttcttcctgacattaaagccctgcagggatgggaggca
gcagctcaaaaagcccatggtgagagtgaaagagtacttcgagaggcaaaagcctttgag
aaaaagcttgccgaaaacacctctgaaagagaaagcctgaacgggaaaatcaggacttcc
ctggcactgatcgaaaattacgggcagaggcttgaagagctcaatgagaaactaaaagtg
cttgccgagcgggagactcaggaaaaggaaaaactcaaaaccctgggagttgagcttgaa
accctgcggaaaaaagaagccgcggtaaaagaaacctatgaagagagtgcaaagcgtctc
ttgaagacaaaaaaactcggggcaaacctgatccagatggataacgttaagcacaaaatc
tccgagcttgaggcttcaatcaggaaccttgccgaaaaagtcggcttctttgacagggaa
atccttgaaagaaacgaacgggtaaaacagcttgaaggaaagctgcaggggagcaggttc
gaagatcttcagtcacagcgtgcccagcttgaagagtatcaggcaaaccttactgaaaaa
atccggcaaataacggctgccaaagatgcgctcttaaaagaagtcggtatggtcgagaat
agtctaaaacgtcgcaatgagctgaaagaagaactcaaagctcttgagaacaggcagcag
tacctcgaagccgtatatagcaacgccgaggagcttgagagcatgtatatgcgcgttcgg
gctgatatgcggacaaaaaacataggagctctttctacccttttgaatgaaatgttcagc
tttatgtatacaaataatgcctattcccatatcgaacttgacccggaatataacctgacg
gtttacagaaaagacggcaccccccttgaaccaaaactccttagcgggggagaacgtgca
atctttaacctcgtcctgcgctgtgcgatctacaggcttcttgccatgggttttggcgga
gatagagcagacgggctcccccctatgatccttgatgagcctacggttttcctggaccgc
gggcatataaaccagcttttgaaactcatagacatgatgcgcggcataggtgtaggccag
attattgtggtatcccatgatgaatccctaatagattcggcagaccacgtcttccaggta
gaaaaagaccctattaccaatatgtcgtctattgcaaagctttaa
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