Methanosarcina vacuolata: MSVAZ_3168
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Entry
MSVAZ_3168 CDS
T03815
Name
(GenBank) Transcriptional regulator, TetR family
KO
K18939
TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
Organism
mvc
Methanosarcina vacuolata
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvc03000
]
MSVAZ_3168
Transcription factors [BR:
mvc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MSVAZ_3168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_13_2
TetR_N
Glyco_transf_99
Motif
Other DBs
NCBI-ProteinID:
AKB45437
UniProt:
A0A0E3Q946
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Position
complement(4089189..4089749)
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AA seq
186 aa
AA seq
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MNTREKILTTAAFLFQKNGYHATGLNEIIKESGTPKGSLYYYFPNGKEELVAATIKLMGD
KIQHQIEEELAKNSDPVQAFKEFILDLARDFNEKDHENCFSISLLALETVSMSESLRKTC
IEVYDLWTDIYYHKLVDSGFSSEKATELSSILQLMIEGAITVSLIRNDTTMLVAAAEKIP
ILLDNN
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacgtgaaaaaatccttacgacggctgcttttttattccagaaaaatgggtat
catgctactggattaaatgagatcattaaagaaagtggaactccgaaaggatcattgtat
tattattttccaaatggaaaagaggaattagtagcagctactataaaattgatgggagat
aaaattcaacatcaaatcgaagaagaattagcaaagaatagcgatcccgttcaagccttt
aaggagttcattctggatttggcacgggacttcaatgaaaaagatcacgaaaattgtttt
tctatcagtttgctggccttagagacagtctcgatgagtgagtctttacgaaaaacctgt
attgaagtctatgatctatggacggatatatattatcataaattggttgatagtgggttt
tcatcagaaaaggctacagaattaagctcaattcttcaattaatgatcgaaggcgcgata
acggtatctttgattcgtaatgatactaccatgctggtagctgcagcggaaaaaattcca
attttactagataataactaa
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