KEGG   Methanosarcina vacuolata: MSVAZ_3397
Entry
MSVAZ_3397        CDS       T03815                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mvc  Methanosarcina vacuolata
Pathway
mvc03030  DNA replication
mvc03410  Base excision repair
mvc03420  Nucleotide excision repair
mvc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mvc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSVAZ_3397
   03410 Base excision repair
    MSVAZ_3397
   03420 Nucleotide excision repair
    MSVAZ_3397
   03430 Mismatch repair
    MSVAZ_3397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mvc03032]
    MSVAZ_3397
   03400 DNA repair and recombination proteins [BR:mvc03400]
    MSVAZ_3397
DNA replication proteins [BR:mvc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSVAZ_3397
DNA repair and recombination proteins [BR:mvc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSVAZ_3397
   MMR (mismatch excision repair)
    Other MMR factors
     MSVAZ_3397
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSVAZ_3397
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 DNA_pol3_beta_3 RhaB_D2
Other DBs
NCBI-ProteinID: AKB45666
UniProt: A0A0E3LIA2
LinkDB
Position
4345932..4346669
AA seq 245 aa
MFKAAINAELLKDAVAALAVIVDEVRFKINPEGISVKAVDPANVAMGIFELGSSAFDEYN
ADECEIGVDLNKIMDLLGIADKNDTVRMELEEGNHKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGTDLRRAVKAAEKISDHMLMGVSDDTFYMEAKGDTDKVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKINEVTLSLGKDFPILIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttaaggcagcaattaatgcagagcttctgaaagacgcggttgccgcactagctgta
attgtagatgaggtcagattcaagataaacccggaaggtatttcggtaaaagccgttgat
cctgccaacgttgcaatgggaattttcgagcttgggtcatctgctttcgacgagtataac
gctgatgaatgtgaaatcggagttgatctgaacaagattatggacctgctgggaatcgca
gataagaacgacacagtccggatggaacttgaagaagggaatcacaaacttctgattgat
gtcggaggactgtcttatacactctctcttctcgatccttctacaattcgggcagagcca
agagttccacaacttgaattgcctgctaaagtcgtccttaacggtacagacctcagacgt
gctgttaaagctgccgaaaaaataagcgaccatatgctcatgggagtttcggacgacaca
ttctatatggaagcaaaaggcgataccgacaaggttcgtctcgagatgggcagggatcag
ctaatcgacctgaaggcaggagaagcatgttctcttttctctctggattatctgaccgat
atagtcaaacccacgaataaaatcaatgaagttactctttcccttggaaaagacttccca
atactcatagatttcgaaattgcgaacggtgcaggaaggatttcgtacctcctggctcca
agaattgagtcggactga

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