Microterricola viridarii: AWU67_00225
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Entry
AWU67_00225 CDS
T04252
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mvd
Microterricola viridarii
Pathway
mvd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWU67_00225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvd03019
]
AWU67_00225
03400 DNA repair and recombination proteins [BR:
mvd03400
]
AWU67_00225
Enzymes [BR:
mvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWU67_00225
Messenger RNA biogenesis [BR:
mvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWU67_00225
DNA repair and recombination proteins [BR:
mvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWU67_00225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AMB60244
UniProt:
A0A109QXV0
LinkDB
All DBs
Position
51129..52934
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AA seq
601 aa
AA seq
DB search
MHTVFGYESFRGEQGAIIEQLAGGGDAVVLMPTGGGKSLCYQIPALLREGTGIVVSPLIA
LMQDQVDALNAVGVRAAYLNSSQDAGERSNVERAYLAGELDLLYIAPERLGSEQAKQFLA
RGHVALFAIDEAHCVSQWGHDFRPDYLALGELAERWPDVPRIALTATATDATHKEITSRL
HLERAAHFVSSFDRPNIQYRIVEKNEVRKQLLDFIRTEHTGDAGIVYALSRATTEKTAAF
LQANGVNALAYHAGLDQGVRARTQSRFLREDGIVVVATIAFGMGIDKPDVRFVAHIDLPK
SVEGYYQETGRAGRDGEPSTAWLAYGLQDVVQQRRMIDSSPGDVTHKRRMAAHLDAMLAL
CETVECRRVNLLSYFGQPSSPCGNCDTCLAPPASWDGTVPAQKLLSTVVRLRRERNQSFG
AGQIVDILRGKTTPRTTQHKHEALATWGIGADLGDQQWRGVVRQLLAQGLLASTGDYGTL
AMTEAGAEVLSGNRAVSLRTEPERAASSGRSRSSKQSAALADLSPAGVELFEALRAWRSE
TAKELGQPAYIVFGDATLKAVAAARPRSLAELDGISGIGAKKLESYGEALVTVVTAFAPV
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ctgcacaccgtgttcggctacgagtcgttccgcggtgagcagggcgccatcatcgaacag
ctcgccggcggcggcgacgccgtcgtgctgatgcccaccggcggcggcaagagcctctgc
taccagatccccgcgctgctgcgcgagggcaccggcatcgtcgtctcgccgctgatcgcg
ctgatgcaagaccaggtcgacgcgctgaacgccgtcggcgtccgggccgcctacctcaac
tcctcgcaggatgccggcgagcgttcgaacgtcgaacgcgcctacctcgccggcgaactc
gacctgctctacatcgcgccggagcggctcggcagcgagcaggcgaagcagttcctggcc
cgcggccacgtcgccctgttcgcgatcgacgaggcacactgtgtctcgcagtggggccac
gacttccgcccggactacctggccctcggcgagctggccgagcgctggcccgacgtgccg
cgcattgcgctcaccgcgacggcgacggatgccacccacaaggagatcacctctcggctg
cacttggagcgtgccgcgcacttcgtctccagcttcgaccggccgaacatccagtaccgg
atcgtggagaagaacgaggtgcgcaagcagctgctcgacttcatccgcaccgagcacact
ggcgatgctggcatcgtctacgcgctctcccgggcgaccaccgagaagacggcggcgttc
ctgcaggccaacggcgtgaacgcgctggcgtaccacgcgggcctcgaccagggcgtgcgc
gcccgcacccagtcgcggttcctccgtgaggacggcatcgtcgtcgttgccacgatcgcc
ttcggcatgggcatcgacaagcccgatgtgcgcttcgtcgcccacatcgacctgcccaag
tccgtcgagggctactaccaggagaccggccgcgccggccgcgacggagagccgtcgacg
gcctggctcgcctacggcctgcaagacgtcgtgcagcagcgccgcatgatcgactcctcg
cccggcgacgtgacgcacaagcgccgcatggccgcgcacctggacgccatgctcgcgctc
tgcgagacggtcgagtgccgccgcgtcaacctgctcagctacttcggccagccgagctca
ccctgcggtaactgcgacacctgtctggctcctcccgcatcctgggacggtaccgttccg
gcgcagaagctgctctcgacggtggtgcggctgcgccgcgagcgcaaccagagcttcgga
gccgggcagatcgtcgacatcctgcgcggcaaaaccacaccgcgcaccacgcagcacaag
cacgaggctctggcgacctggggcattggcgccgacctcggcgaccagcagtggcgcggc
gtcgtgcgccagctgctggcgcagggcctgctcgcatccaccggcgactacggcaccctg
gcgatgacggaagccggggctgaggttctctccggcaatcgcgccgtctcgctccgcacc
gagccggagcgggccgcgagcagcgggcgcagccggtccagcaagcagtccgcggcgctc
gccgacctcagcccggccggtgtcgagctgttcgaggcgctgcgcgcctggcgctccgag
accgccaaggagctcggccagcccgcatacatcgtgttcggcgatgccacgctgaaagcg
gtggccgcggcgaggccgcgctcgctcgctgagctcgacggcatcagcggcatcggcgcc
aagaagctggagtcctacggcgaggctctcgtcacggtcgtcaccgccttcgcccccgtc
ggctag
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