Microterricola viridarii: AWU67_00845
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Entry
AWU67_00845 CDS
T04252
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mvd
Microterricola viridarii
Pathway
mvd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWU67_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvd03021
]
AWU67_00845
03400 DNA repair and recombination proteins [BR:
mvd03400
]
AWU67_00845
Enzymes [BR:
mvd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWU67_00845
Transcription machinery [BR:
mvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWU67_00845
DNA repair and recombination proteins [BR:
mvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWU67_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Not3
YlqD
DUF1690
Motif
Other DBs
NCBI-ProteinID:
AMB57644
UniProt:
A0A0Y0MXG2
LinkDB
All DBs
Position
188351..192244
Genome browser
AA seq
1297 aa
AA seq
DB search
MLDATTFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
SCGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVIDVDEDGRHQDSPGLENELRLEIKTIGDSRDSRIAKRLTKLEED
LAALEAEGAKSDQKKRTKDAAEKEMNQTRKAADEQIAHLERVWEDFRNLKVGDLKPEDSV
FHELQDRFGMYFEAYMGAEAIKKRLEAFDLAAEAENLHLQITEGKGQKKIRAIKRLRVVS
SFLATGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKAAKRMVERSR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPTQDMIIGLHHLTTVKDGVVGEGR
AFSSVSEAILAFDQKSLDLNAKVRIRLTDQHFAEGTQPEGVELVDGKAVGTVLVNTSLGR
ALFNEALPANYPYFEKVADKGTISEIVNDLAERYAKVDVAAALDNIKDAGFKWATRSGVT
VALSDILTPPNKREIVAGYEKQAAKVQSQFDKGLTTDLERRQELIKIWTKATEDVAEAMR
ANFPEDNTINRMVTSGARGNWLQVRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYF
IATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTGKGLELPIAAEVDGVLV
RDSNVENAVYARSLAAAAVNAAGEVVAEAGEDVGDVLIDMLIEKGVGSIKVRSVLTCESA
VGVCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLP
RVQELFEARTPKGASPIVEAPGRITIEDTDRNRRVILTPDSGDEPIVYNVLKRSTLLVED
GQHVELGQQVIVGTLDPKEVLRVKGVREVQKHLVGGVQGVYRSQGVPIHDKHIEVIVRQM
LRKVTVVDHGDTDLLPGELVDRMKYNELNRAALTEGKKTASARQEVMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLPRYRDVTVEATEEAKAE
RYPNRIFTDDASFNEGDLSFVDFDSFSSDDFTPGNYS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgcaaccacatttgacgagcttcgtattggtctggctaccgccgacgacatc
cgtcgttggtcgcacggtgaggtcaagaagcccgagacaatcaactaccgcaccctcaag
ccggagaaggatggtctgttcggtgagcagatcttcggaccgagccgtgactgggagtgc
tcctgcggcaagtacaagcgtgttcgcttcaagggcatcgtttgtgagcgttgtggcgta
gaggtcacgaagtcgtctgtgcgccgtgagcgcatgggccacatcgagctcgccgccccc
gtcacccacatctggtacttcaagggtgttccctcgcgtctcggctacctgctggacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatggtgatcgacgtagac
gaagacggacgccaccaggactcgcccggccttgagaacgagcttcgcctcgagatcaag
accatcggcgacagccgggactcgcgcatcgcgaagcgtctgaccaagctcgaggaagac
ctcgccgccctggaggcggaaggcgccaagagcgaccagaagaagcgcaccaaggatgca
gccgagaaggagatgaaccagacccgtaaggcggcggacgagcagatcgcccacctcgag
cgtgtctgggaggacttccgcaacctcaaggtcggcgacctgaagccggaagactccgtc
ttccacgagctgcaggaccgcttcggcatgtacttcgaggcctacatgggcgccgaggcc
atcaagaagcgcctggaggccttcgacctggccgccgaggccgagaacctgcacctgcag
atcaccgagggcaagggtcagaagaagatccgcgccatcaagcgtctgcgcgtggtgagc
tccttcctggcaaccggcaactcgccggccgccatggtgctcgacgtggttcccgtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctgcgtcgtctgcttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgttgacgca
ctgttcgacaacggtcgtcgtggacgccccgtcaccggtaccggcaaccgcgccctcaag
tccctgagcgacatgctcaagggcaagcagggtcgcttccgccagaacctgctcggaaag
cgcgttgactactccggccgttcggtcatcatcgtcggcccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggcgctggagctcttcaagccgttcgtgatcaagcgcctg
atcgacctgagccacgctcagaacatcaaggctgcaaagcgcatggtcgagcgttcacgc
ccgcaggtctgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctgaaccgc
gcacccaccctgcaccgcctgggcatccaggccttcgagccgatgctcgtcgagggtaag
gccattcagctgcacccgctcgtgtgtgctgcgttcaacgccgacttcgacggtgaccag
atggctgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctgaagccgtccgacggccgcccggtgaccctgcccacccaggac
atgatcatcggtctgcaccacctcaccaccgtcaaggatggtgtcgtcggcgaaggccgt
gcgttctcctctgtctctgaggcgatcctcgccttcgaccagaagtcgctcgacctcaac
gccaaggtgcgcatccgcctcaccgaccagcacttcgccgagggcacgcagcccgagggt
gtcgagctggttgacggcaaggctgtcggaaccgtcctggtcaacacgtcgctgggtcgc
gccctcttcaacgaggcgctgccggcgaactacccgtacttcgagaaggtggccgacaag
ggcaccatctcggagatcgtgaacgacctggccgagcgttacgccaaggtcgatgttgcc
gctgcactggacaacatcaaggatgccggtttcaagtgggctacccgctcgggcgtgacc
gttgcgctcagcgacatcctgaccccgccgaacaagcgcgagatcgtggccggctacgag
aagcaggctgccaaggtccagagccagttcgacaagggtctgaccaccgacctcgagcgt
cgtcaggagctcatcaagatctggaccaaggcgaccgaagacgtcgctgaggccatgcgc
gcgaacttccccgaggacaacaccatcaaccgcatggtgacctctggtgctcgtggtaac
tggctgcaggttcgtaacatcgccggtatgcgtggtcttgtgaacaacccgaagggtgag
atcatccctcgcccgatcatctcgagctaccgcgaaggcctgtccgtcgccgagtacttc
attgctactcacggtgctcgtaagggtctggccgacaccgctctgcgtaccgcagactcc
ggttacctcacccgtcgcctcgtcgacgtgtcgcaggacgtcatcatccgtgaagacgac
tgtggcaccggcaagggcctcgagctgcccatcgcggccgaggttgatggtgtgctggtt
cgcgactccaacgtcgagaacgcggtctacgcccgcagcctggccgcagcagcggtcaac
gccgccggcgaggtcgttgccgaggccggtgaggacgtcggtgacgttctgatcgacatg
ctcatcgagaagggcgtcggcagcatcaaggtgcgctccgtcctgacctgtgagtcggct
gttggtgtgtgtgcgaagtgctacggccgttcgctcgcgaccggcaagctcgtcgacatc
ggtgaggccgtcggtatcatcgcggcccagtcgatcggtgagcccggaacccagctgacg
atgcgtaccttccacaccggtggttccgcatccgcagatgacatcacgcagggtctgccc
cgcgtgcaggagctcttcgaggcccgtacccccaagggtgcgtcgccgatcgttgaggcg
cctggccgcatcaccatcgaagacaccgaccgcaaccgtcgcgtgatcctcacccccgac
tcgggtgacgagccgatcgtctacaacgtcctgaagcgctccacgcttctcgttgaggac
ggccagcacgtcgagctcggtcagcaggtcatcgtcggcacgctcgacccgaaggaagtt
cttcgcgtcaagggtgtccgcgaggtgcagaagcacctcgtcggcggcgtgcagggcgtt
taccgctcgcagggtgttccgatccacgacaagcacatcgaggtcatcgttcgccagatg
ctgcgcaaggtcaccgtcgtcgaccacggcgacaccgacctcctgcccggcgagctcgtc
gaccgcatgaagtacaacgagctcaaccgtgctgcgctcaccgagggcaagaagacggct
tcggcccgtcaggaagtcatgggtatcaccaaggcttcgctggcgaccgagtcgtggctg
tcggccgcttccttccaggagaccacccgcgttctgacgcaggcggccatggaaggcaag
agcgacccgctggtcggcctcaaggagaacgtcatcatcggtaagctcatcccggccggc
accggtctgccccgttaccgcgacgtcaccgtcgaggcaacggaggaggccaaggccgag
cgttacccgaaccgcatcttcaccgacgatgcatcgttcaacgagggtgacctgagcttt
gtcgacttcgacagcttcagctcggacgacttcaccccgggcaactacagctag
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