Microterricola viridarii: AWU67_05720
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Entry
AWU67_05720 CDS
T04252
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mvd
Microterricola viridarii
Pathway
mvd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWU67_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvd03019
]
AWU67_05720
03009 Ribosome biogenesis [BR:
mvd03009
]
AWU67_05720
Enzymes [BR:
mvd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AWU67_05720
Messenger RNA biogenesis [BR:
mvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWU67_05720
Ribosome biogenesis [BR:
mvd03009
]
Prokaryotic type
rRNA processing factors
AWU67_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AMB58434
UniProt:
A0A0X8E160
LinkDB
All DBs
Position
1254998..1257604
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AA seq
868 aa
AA seq
DB search
MVDKTNNEPGTNDATADSMKNPIKKRPRIFGARKKRVEDTVETAAEPQTTNAVAAAPKES
APSEAAPVDAAPGAPVEDVPVAPEAAPAAAEEAPVEEAPAASAPVIPTQLSTTSLIFHAP
VITPLPARPGAEREFGRDFPRDFDHDADDASTVRRRARRRSGEESRSGSDDPANTVVKVR
TPREPELITEPQRIKGSTRLEAKKQRRRDGRDAGRRRTVITEAEFLARRESVDRSMVVRA
KNNKIQIGVLEDSVLVEHYVAKNQEASLIGNVYLGRVQNVLPSMEAAFIDIGRGRNAVLY
SGEVDWDAAAAENPGGNQPRRIELALKPGDKVLVQVTKDPVGHKGARLTSQVSLPGRYLV
YVPNGSMNGISRKLPDTERARLKKILKEVLPDNVGVIVRTAAEGATEEQLTLDVQRLISQ
WASISSQLQTVQAPALLHSEPDLLIKIVRDVFNEDFQKMIISGDDAQEVIESYLRGVAPD
LLERVERYEGEKDAFDEFRISEQIEKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVG
SGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVSRRLIECLSRD
RTKHQVAEVTSLGLVQMTRKKLGLGLLESFSENCEACAGRGIIVHHDPVVKHRQTPQQAP
QQERRRSKGAPVQQQQAPVAAEKVSGTHGITEDAKNALAQIAASTLAHPAEAAKADEQVQ
QGIQQNGAGEPRSSRSRNRKSRSGRGQQAADRPAEAAASVEAPAQPAVQPATQPAKDAAV
APQAETPVAVKPEPIAILDIPVAAAPRQSRTVSSKAAEELLGSVLEALPEPKQPGQGRSR
SRRVSTAALSTTPVVPIITGTGAGASDE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaccaacaatgagccaggcaccaacgacgcgacagcggattcgatgaag
aacccgatcaagaagcgcccacgcatcttcggcgcgcgcaagaagcgcgtcgaggacacc
gtggagacggccgcagagccgcagaccacgaacgcggtcgctgcggcgccaaaagaatct
gcgccaagcgaagctgcgcctgtggatgccgcgccgggcgctcccgtcgaggacgtgccc
gtcgcgccagaggcggccccggccgccgcagaagaagcccccgtcgaggaggctcctgcc
gcgtctgcacccgtcatcccaacccagctcagcacgacctcgctgatcttccacgccccc
gtcatcacgccgctgccggcacgccccggcgccgagcgcgagttcggccgtgatttcccc
cgtgacttcgaccacgacgccgacgacgcctccacggtgcgtcgccgcgcccgccgccgt
tcaggcgaagagagccgttccggctctgacgacccggcgaacaccgtcgtgaaggtgcgc
accccgcgcgagccggagctcatcaccgagccgcagcggatcaagggctccacccgcctc
gaggccaagaagcagcgccgccgcgacggccgcgacgccggccgccgccgcaccgtcatc
accgaggccgagttcctcgcccgccgtgagtcggttgaccgcagcatggtcgtgcgcgcc
aagaacaacaagatccagatcggtgtcctcgaagacagcgtgctggtcgagcactacgtc
gccaagaaccaggaggcgagcctgatcggcaacgtctacctcggtcgcgtgcagaacgtg
ctccccagcatggaggccgccttcatcgacatcggccgcggccgcaacgccgtgctctac
tccggcgaggtcgactgggatgccgccgcggcggagaaccccggtggaaaccagccgcgc
cgtattgagctggcgctgaagcccggcgacaaggtgctcgtccaggtcaccaaagacccg
gtcggccacaagggcgcccgcctcaccagccaggtctcgctgcccggccgctacctcgtc
tacgtgccgaacggttccatgaacggcatcagccgcaagctgccggacaccgagcgcgcc
cgcctgaagaagatcctcaaggaggtcctgcccgacaacgtcggcgttatcgtgcgcacg
gcggcagagggcgcgaccgaagagcagctcaccctcgacgtgcagcgtctgatcagccag
tgggccagcatcagctcgcagctgcagaccgtgcaggctcccgccctgctgcactccgag
cccgacctgctcatcaagatcgtgcgtgacgtcttcaacgaggacttccagaagatgatc
atctccggcgatgacgcccaggaagtcatcgagagctacctgcgcggtgtcgcccccgac
ctgctcgagcgcgtcgagcgctacgagggcgagaaggatgccttcgacgagttccgcatc
tcggagcagatcgagaaggcgctggaccgcaaggtctggctgccctccggtggatccctc
gtgatcgaccgcactgaggccatgaccgtcgtcgacgtcaacaccggcaagttcgtcggc
tccggcggcaacctcgaagagaccgtcaccaagaacaacctcgaggctgcggaagagatc
gtccgccagctgcgcctgcgtgacatcggcggcatcatcgtcgtcgacttcatcgacatg
gtcctcgagtccaatcgcgacctggtctcgcgccgcctgatcgagtgcctgagccgtgac
cgcaccaagcaccaggtggctgaggttacctcgctcggcctcgtgcagatgacgcgcaag
aagctcggcctcggcctgctggagtcgttcagcgagaactgcgaggcctgcgccggccgc
ggaatcatcgtgcaccacgaccccgtggtcaagcaccgccagacgccgcagcaggccccg
cagcaggagcgtcgtcgttccaagggtgccccggttcagcagcagcaggcgcccgtcgcc
gccgagaaggtgtccggaacgcacggcatcaccgaggacgccaagaacgccctcgcccag
atcgccgcgagcaccctggcccaccccgccgaggctgcgaaggccgacgagcaggtccag
cagggcattcagcagaacggcgcaggcgagccgcgcagctcgcgttcacgcaacaggaag
agccgcagcggccgtggccagcaggcagcggaccgccccgcagaggcggcagcctccgtc
gaggcccctgcgcagcccgctgtgcagcccgctacgcagcccgcgaaggacgctgctgtc
gcgccgcaggcggagactccggtcgccgtgaagcccgagccgatcgccatcctcgacatc
cccgtcgccgccgcaccgcgccagtcgcgcaccgtgagcagcaaggcggcggaggagctc
ctcggctccgtgctcgaggcgctgccggagccgaagcagcccgggcagggccgcagccgc
agccggcgcgtctccaccgcagcattgtcgaccacgccggtcgttccgatcatcaccgga
accggagccggcgcatcggacgagtag
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