Microterricola viridarii: AWU67_06435
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Entry
AWU67_06435 CDS
T04252
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
mvd
Microterricola viridarii
Pathway
mvd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mvd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AWU67_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvd03021
]
AWU67_06435
Transcription machinery [BR:
mvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AWU67_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_holin_6_1
Motif
Other DBs
NCBI-ProteinID:
AMB58555
UniProt:
A0A0X8E1E5
LinkDB
All DBs
Position
complement(1395454..1396764)
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AA seq
436 aa
AA seq
DB search
MHEARSERRRRPRDHRSRRSPGQEGPVRKAPTKAALAKAAAAEAALAEAEATGAEKPAAA
KAAPRKRAATKKAADETADDSAVEAVEDADDEDEDGQPKRSVVTEPLPTGALVLSVTDDE
DDVPVYSSAITGATADPVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAEDKLSHMTDAE
KKSQLGRELQWVAKDGARAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAV
EKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGR
EPTPEELSRELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVG
FTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIESKTMA
KLRHPSRSQSLRDYLE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atccacgaagcccgtagcgagcgaagacgccgcccccgagaccaccgaagccgtcgcagc
cccggccaagaaggccccgtgcgcaaggcgcccaccaaggcagccctggccaaggccgct
gcagcagaggccgcactggccgaggccgaagcaaccggcgcagaaaagcccgcagcggcg
aaggccgcgccgcgcaagcgtgcagccaccaagaaggccgcagacgagaccgccgatgac
tccgccgttgaggccgtcgaggatgccgacgacgaggatgaggacggccagcccaagcgc
tccgtcgtcaccgagccgctgcccaccggcgccctcgtcctctccgtcaccgacgacgag
gacgacgtccccgtctactccagcgccatcaccggcgccaccgccgaccctgtcaaggac
tacctgaagcagatcggtaaggtcgccctgctgaacgcggccgaagaggtcgagctggcg
atgcgcatcgaggccggcctgttcgccgaggacaagctctcgcacatgaccgacgcagag
aagaagtcgcagctcggccgcgagctgcagtgggtcgccaaggatggcgcccgcgccaag
agccacctgctcggagcgaacctccgtctcgtcgtctccctcgccaagcgctacaccggt
cgtggaatgcagttcctcgacctcatccaggagggcaacctgggcctcatccgtgcggtc
gagaagttcgactacaccaagggcttcaagttcagcacctacgccacctggtggatccgt
caggccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcgcccgcgtccagcgccagatgctgcaggacctcggtcgc
gaacccacgccggaagagctcagccgcgagctggacatgacgcctgagaaggtcgtcgaa
gttcagaagtacggccgcgagcccatctcgttgcacacgccactcggtgaggacggcgac
agtgagttcggtgacctcatcgaggacaccgaggctgtcgttcccgctgacgccgtcggc
ttcaccatgctgcagaagcagctggaaagcctgctcgactccctgtccgagcgcgaggcc
ggcgtgatccgcatgcgcttcggcctgggcgacggcatgccgaagaccctggaccagatc
ggcgacacgttcggcgtcacccgcgagcgcatccgccagatcgagtccaagacgatggcc
aagctgcgccaccccagccgctcgcagtcgctgcgcgactacctcgagtag
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